KEGG   Amyelois transitella (navel orangeworm): 106135199
Entry
106135199         CDS       T09957                                 
Name
(RefSeq) nuclear pore complex protein Nup160 homolog isoform X1
  KO
K14303  nuclear pore complex protein Nup160
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106135199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106135199
   03036 Chromosome and associated proteins [BR:atra03036]
    106135199
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106135199
Chromosome and associated proteins [BR:atra03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    106135199
SSDB
Motif
Pfam: Beta-prop_Nup120_160 TPR_NUP160_120_M HEAT_Nup120 NUP160_helical TPR_Nup160_C
Other DBs
NCBI-GeneID: 106135199
NCBI-ProteinID: XP_013190886
LinkDB
Position
11:join(4845527..4845620,4846119..4846224,4846787..4847003,4847413..4847518,4847851..4848046,4848533..4848705,4848883..4849046,4849129..4849222,4849610..4849761,4850312..4850451,4850864..4850945,4851234..4851363,4851493..4851695,4852078..4852201,4852379..4852475,4852967..4853119,4853639..4853860,4854235..4854353,4854695..4854867,4855185..4855280,4855607..4855739,4856921..4857082,4857341..4857501,4859027..4859108,4859196..4859329,4859644..4859841,4860286..4860366)
AA seq 1263 aa
MEFSEAIPITFKEITPNYNIPEKWKEVMLNTGGTHSTLQDIKLPQKAGGYWYMDSKKVNI
RNRFLYWQTTSDAIEISESSLDTNLTGSHLRCKVAPGTPPLSNIMAYERLSTKEVTILAA
TVSSVHRLIFPHPESFDKKSTFGSMSTSSPSIFHDTSSINNPNNYCILNQYSNATSGVAH
TCASLLRDNGEAVFALAFGYGGEGGLLLVKLPISGNAVITVLKRESTVPRFLSGITGALR
GKSAADGVETYGVILTHSLAVAICGDACLRAWSLDDGGSPVAVSPPLSQTLVRPKPPPHG
HMLQKTSGPDGSIILVAYLSFPNECEFVVMKMHDAGAGAVRFSHICRLFGPQLDLLDYAI
GYGDGNNVIWALWSQPDGETVITSSCAGVEASWRAVGRNEALPPLPTLGSPRLYRERLLA
PGLFPPAVISKALLIYRRTWGNNETSIEGDLGEAAASAVQARLRQLAARAAAPDHAHLMH
KCWSDLYSWCVQYMEGLQKPLGLMVSQHHNSMEESEGGWWCGVVRRAGISLVRELEPLER
MMCEQDDDSGKVPADSECALSTDAMRVVCAGAQWERAATPSGAAELERRLFACCAVQHRL
LPRMLHLLLSADVDDTNSTILTPQQVDELTAILEPIKDLQSAVLELNDALRLDVPEIDSK
DDDEEYSDYDNLFSSDLGVSIVTEAIRQMAEMRSRVARGALAALGAARGAGGAPGAGHCA
VHWQAYRALLWLRAAALRPAPHAISSNSLEAFRLKLSVLGAEPCTLPQSRGGGAEGAMAA
YVRGAGGRRARAHLAAARAPLHWHQALPLFTYHLAHQLWAVSGGFEFGWWLATINQPQLV
QSYVAMLEPWCEWNACSRQFILGLALLDLEDVEGAYTAFCKAAKGVSTEPFLRQLVAATD
THLTQHQALVLYYMKVIKLFEIHDAGACVVRLAETAISIADKDDPNLPMFQWLVFKWHLS
GGRVQRALGAAAANPAPAARAAAAATLLTTLAQRKQLSALVSCGVLAAEAERAAAQRAKL
ADAHQNNPYYDFLYALHVSRHHYRKAAAVMYERAARCAAERGEAGAARRGWLAAALTCLR
LARPEHAFLARPEPDAGLQVIGPEELAAELREEDPDSLDPVQKALIKNENIDFDKLYPRL
KEADAETLLLVTKRIVSTGQFMPHWFLQRYMEVDGAGCVRALLHGGRCAEAAAACCAVLR
RALSRLHVPTPAAAPLHLADLLLAELAHNTHHAPLKQVYEELDLLVKEYTQVVIRTSEDM
KTF
NT seq 3792 nt   +upstreamnt  +downstreamnt
atggaattttctgaagccattcctataacttttaaagaaataacgccaaattataatatt
cctgaaaaatggaaagaagtgatgttaaacacaggaggcacacacagtactttacaagat
atcaaattacctcaaaaagctgggggatattggtatatggattcaaagaaagttaatata
agaaatagatttttgtactggcaaaccacatcagatgcaatagagatatcagagtcatct
ctagacacaaacctgacaggatcacatttaagatgtaaagtggctcctggcacaccacct
ttgagtaacataatggcatatgaaagactgagtaccaaggaagttaccattttagctgcc
actgtgtcttctgtacatcgactgatctttcctcaccctgaatcttttgataaaaagtca
acttttggatctatgagtacatcatcaccatcaattttccatgatacaagttccataaat
aatcctaacaattattgtatcctgaatcagtattctaatgccacatctggtgtagcacac
acctgtgcatcactattacgagacaatggtgaggcggtgtttgcactagcatttggctat
ggtggagaaggagggttgctgcttgttaaattgcccatatcaggaaatgcagtcattaca
gtattgaaaagagagtccactgtcccacgatttctatcaggaattactggagctttgaga
ggcaagagcgcagcagatggagtggagacgtacggcgtgattctcactcacagtttagcc
gtggcaatctgtggggatgcttgcttacgcgcatggtcgctggacgacggcgggtcgcct
gtggcagtgtcgccaccgctctcacagacgttagttcgacccaaacctccgccgcatggg
catatgctacaaaaaaccagtgggccagatggcagtataatattggttgcgtatttatcc
tttccgaatgagtgcgaatttgttgtcatgaaaatgcacgacgcaggcgccggtgcagtg
agattttcgcatatttgcagactgtttggaccacagcttgacctgctggattatgctatt
gggtatggagatggcaacaatgttatttgggcgttatggagtcaaccagatggagaaact
gttatcaccagtagctgtgcaggcgtggaggcgtcgtggcgcgccgtgggtcgcaatgag
gcgttgccgccgctgccgacgttgggctcgccgcgactgtaccgcgaacggctgctcgcg
ccaggcctcttcccaccggctgtgatcagcaaggccttacttatatacagacgaacgtgg
ggcaacaacgagacgagcatcgaaggcgacctgggcgaggcggccgccagcgccgtgcag
gcccggctgcggcagctggccgcgcgcgccgccgcgcccgaccacgcccatctcatgcac
aaatgttggtccgacttgtacagttggtgtgtacagtatatggaaggtttacagaaacca
ctgggactaatggtatcccaacatcataactctatggaagagagtgaaggtggttggtgg
tgcggagtggtgcgtcgcgcgggcatctcacttgtacgcgaactcgagccgctcgagcga
atgatgtgtgagcaggacgacgatagcggcaaagtgcctgccgacagcgagtgcgcgcta
tccacagacgcgatgcgcgtggtgtgcgcgggcgcacagtgggagcgtgcggcgacgccg
agcggcgcggccgaactggagcggagactgttcgcgtgctgcgccgtgcagcaccgcctg
ctgccccggatgctgcacctgctgctctccgccgacgtggacgacaccaactccacgatt
ctgacaccgcaacaagtggacgaactgacagccattttggaacccatcaaagatctccaa
agcgcggtgctcgagttgaacgacgctctaagactagacgtacctgaaattgattctaaa
gatgatgatgaagaatacagcgattatgacaacctgttctcaagtgatttaggagtttct
atcgtcactgaagcaattcgacaaatggcagaaatgaggtcgcgcgtggcccgcggcgcg
ctggcggcgctgggcgcggcgcgcggcgcgggcggcgcgccgggcgcgggccactgcgcc
gtgcactggcaggcctaccgcgcgctgctgtggctgcgcgccgccgcgctgcgccccgcg
ccgcacgccatctcatcaaactctttggaagcgttccgtctcaagttaagcgtgttggga
gcagaaccttgcactttaccgcagtcccggggcgggggcgcggagggggcgatggcggcg
tacgtgcggggggcgggggggcgccgcgctcgggcacatctggcggctgcgcgcgcgccg
ctacattggcatcaagcgctgccgctgtttacgtaccatctagctcatcaattatgggca
gtgagcggcggatttgaattcggatggtggctggcgacgataaaccaacctcaattggtg
caaagctacgtcgccatgttggagccctggtgcgagtggaacgcctgctctcggcagttc
atcctaggactggcgctcctagatttagaagacgtggagggcgcgtatactgccttctgc
aaggcggccaagggtgttagtacagagcccttcctcaggcaacttgtagccgcgaccgac
acgcatctcacgcaacatcaggcgctagtcttgtattatatgaaggtgataaagctgttc
gagatacacgacgccggcgcatgtgtggtgcgactagccgagaccgccatcagtatcgcc
gataaggatgatccaaatttgccgatgttccagtggctggtgttcaagtggcacctgtcg
ggcgggcgcgtgcagcgcgcgctgggcgcggcggccgccaaccccgcgcccgccgcgcgc
gccgccgccgccgccacgctgctcaccacgctcgctcaacgcaagcagctgagtgcgtta
gtgtcgtgcggcgtgctagcggccgaggcagagcgcgccgccgctcaacgcgctaaactg
gccgacgcgcaccaaaacaacccctactacgacttcctgtatgcgctgcatgtttcccgc
caccattacaggaaagcggccgccgtgatgtacgagcgcgcggcgcggtgtgcggcggag
cgcggcgaggcgggcgcggcgcggcgtggctggctggccgccgcgctcacgtgcctgcgg
ctcgcgcggcccgagcacgccttcctggccaggcccgagcccgacgccggcctgcaggtc
attgggccagaagaattagctgccgagttgcgtgaagaagacccagattcgttggatcca
gtgcaaaaagcattgataaagaacgaaaacatagattttgataagttatacccgcgtttg
aaagaggccgatgccgagacattgctgttggtgacgaagagaatagtaagcacaggccaa
tttatgccccactggtttcttcagaggtacatggaggtggacggcgccggctgcgtgcgc
gctctgctgcacggcgggcgctgcgcggaggcggcggcggcgtgctgcgcagtgttgcgg
cgggcgttgtctcggctgcacgtgcctacacccgccgccgcgccgctgcacctcgcagac
ttgctgctcgccgagctcgcgcacaacacgcaccatgcgccgctcaaacaggtttatgag
gaacttgatcttctcgtcaaagaatacactcaagtagttatacgaacttcagaagacatg
aaaaccttttga

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