Amyelois transitella (navel orangeworm): 106135205
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Entry
106135205 CDS
T09957
Name
(RefSeq) COP9 signalosome complex subunit 1
KO
K12175
COP9 signalosome complex subunit 1
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atra04121
]
106135205
Ubiquitin system [BR:
atra04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
106135205
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Gene cluster
GFIT
Motif
Pfam:
RPN7
PCI
CSN1_C
TPR_2
TPR_11
TPR_12
Antitox_RHH
TPR_1
Motif
Other DBs
NCBI-GeneID:
106135205
NCBI-ProteinID:
XP_013190895
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All DBs
Position
11:complement(join(5557822..5557917,5558705..5560051,5560159..5560170))
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AA seq
484 aa
AA seq
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MFEMNTAEPMQVDVPIEDNENNEAECYLVENPTLDLETYAASYTGFAKLYRLMFVADHCP
PLRLEALKMAISYVMTTYNVSLYQTLHKKLAEAVASSGLPDVAVQMGSQDIPVIDTAWIE
SKTKKAAIKLEKLDTDLKNYKTNSIKESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYC
TSGKHIIMMCLNVVKVSVYLQNWPHVLNYVSKAEGTPDFNEVPGKDSNQSILTRLKCAAG
LAELANKKYKSAAKHFLAASIDHCDYSELLSSNNVAVYGGLCALATFDRSELQKQVIVSS
SFKLFLELEPQLRDIIFKFYESMYASCLRLLDEIRDNLLLDMYLAPHLNSLYMQIRNRAL
IQYFSPYLSADMRLMAAAFNRTVIALEDELMQLILDGQIQARIDSHNKILYAKDVDQRST
TFERSLAMGKEYQRRTSMLILRAAMLKNQIHVKNTGGRDTGPQSGEAPGSSTSLTPRTFD
NLPL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaatgaacacagcggagcccatgcaagtggatgttccaatagaagataacgaa
aacaatgaggcagaatgctatcttgtcgagaatcctacattggatttagagacttacgcg
gcgtcttacactggctttgccaaactgtataggcttatgtttgtggcagaccattgtcca
cctctgaggttggaagctttaaaaatggctatctcatatgtcatgacaacatacaatgta
agtctttaccaaactcttcataagaaactggcagaggcagtagcatcttcaggcttgcct
gatgtagcagttcaaatgggttcgcaagacatacctgtgattgacactgcttggattgaa
tctaaaactaaaaaggctgccattaagttggaaaagttagatacagaccttaaaaattac
aaaacaaattcaataaaagagagcattagaagaggtcatgatgatttaggagatcattac
ctggactgtggagatctcactagtgcactgaagtgttactcacgggcccgagattactgc
acaagtggtaaacacattatcatgatgtgcctcaatgtagtaaaggtgtcagtatatttg
caaaattggccacatgttcttaattatgtgtccaaagcagaaggaacaccagactttaat
gaggttccgggaaaggattcaaaccagtctattcttacccgcttaaaatgtgctgctggt
ttggctgaattagcaaataagaagtataaatccgctgcaaaacattttcttgcggcaagc
attgatcattgtgactattcagagctattgagcagcaacaatgttgcagtctatggcgga
ctttgtgccctggcaacttttgaccgttcagaattacaaaaacaagtcatagttagcagt
tcatttaaattatttctagaactagagccacagttacgtgacataatatttaagttctat
gaatctatgtatgcttcctgtctaaggttactggatgaaataagggataatctcctatta
gatatgtatttagcacctcacctgaattcactctatatgcaaattcgcaacagagctttg
attcagtacttcagcccttacctatcagctgatatgcgcttaatggcagctgcattcaac
cgtacagttatagctctggaagatgagctgatgcaactaatacttgatggacagattcaa
gccagaattgattcccacaacaaaatattgtatgctaaagatgtggaccagagaagtact
acatttgaaagaagtctggctatgggaaaggaataccaacgacggacctccatgctgatc
cttcgcgctgcaatgctcaaaaatcaaattcatgtaaagaatactggcggtcgcgacact
ggacctcagagtggtgaagcacccgggtctagcaccagcctcactccgcgaacttttgat
aacttacccttgtga
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