Amyelois transitella (navel orangeworm): 106135271
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Entry
106135271 CDS
T09957
Name
(RefSeq) acetylcholine receptor subunit alpha-type unc-38
KO
K05312
nicotinic acetylcholine receptor, invertebrate
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atra04040
]
106135271
Ion channels [BR:
atra04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
106135271
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Paralog
GFIT
Motif
Pfam:
Methyltransf_FA
Neur_chan_LBD
TMEM239
Motif
Other DBs
NCBI-GeneID:
106135271
NCBI-ProteinID:
XP_013190974
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Position
26:join(3309128..3309206,3310124..3310324,3310991..3311122,3312205..3312363,3312871..3313058,3313228..3313334,3313774..3313908,3314521..3314626,3315228..3315423,3315965..3316111,3317041..3317201,3317471..3317692)
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AA seq
610 aa
AA seq
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MDWILIPLCVWIGMSAADPGVTYNQEMSAKCKQHICRFGYNYDTYYRIDSNDRKPTDPKV
AFEMHIAIQAASNGHILLSPVEHPSFSDSVYEFVVGGGANTFTELRRNLRKNAKASAKTF
RILSNSELRGFYIKITKDGHVEFGREGKVPPIIDIYDVDPIDVKYFSFASWNGVDARFLY
DCPTPSSNESTRNSTEITPRLSISDQLKKNILTNRFPSLAPSQNMTVEIGTVLISARYDS
FDAKLFTDLAFVTSWKDKSAAWDPDKYNGTTRINFRQTQIWRPTFLVYNANTLDPLDAST
AGLIAMDYSGQNTFHFRTKVESWCVVDDTTALNKWPLDSYDCVIVIRPYQVHELITLKLL
KPTDVKMKFYTDIDIKVRNEWETSATSLVFSSGQWAKLHNTTFNDRTASDVMVIYLTMHR
RAVAYNVAFYTPLVVLVTFLLMSFWTQPLVMSRVWFYSGCAVTISLGLCYIEYIMPCHNV
PSLLVLYITVLFGVLFALLLQVVLMTSIIRALCETQPIQNLLTSYMFRKIFLLTPMTVTK
NYDTLNEGFSYEGEDSDVIIPRTSNVEEMVADVTTEKATFGDPEELAEAFDKLLFFVYSL
AFAVMLALHF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggattggattttaattccattgtgtgtttggatcggaatgagcgctgcagaccctggt
gtgacgtataatcaggaaatgtcagcgaaatgcaagcaacacatctgcagattcggttac
aactacgatacttactaccgcatcgattccaacgacaggaagcctacggaccctaaggtc
gcgtttgagatgcatatagctatacaagccgctagtaatggacacatattactgtcgcca
gtcgaacatccaagtttttcggattctgtgtatgaattcgtggtcggtggtggagccaat
acatttacagaactccggcgcaatttgagaaaaaacgctaaagcatccgctaagaccttt
agaatcttgtccaattctgaattaagaggattctatattaagatcactaaagatggacat
gttgaatttggtagagaaggtaaagtgcctccaatcatagacatctatgatgtggatcca
atagacgttaagtacttcagctttgcttcatggaatggtgtagatgctagattcctctat
gattgtccaactcccagctctaacgaaagcacacgaaactcaactgagatcacaccaagg
ctatctatatccgaccaacttaagaagaacatcttgacgaatcggttccctagtttagcg
ccatcccaaaacatgacagttgaaattggcacggtactcatcagcgcaagatatgactca
tttgatgcaaagctatttaccgacttggcctttgttactagttggaaagataaaagtgca
gcttgggatccagacaaatacaatgggacaaccagaattaattttagacaaacacagata
tggagaccgacattccttgtgtacaatgctaacaccttggacccgctcgacgcgagtacc
gctggcctgattgctatggattacagtggtcagaatacgttccattttaggactaaagtg
gagtcctggtgtgttgtggatgacaccactgctttgaataagtggcctttggatagctat
gactgcgtaattgttattcgaccatatcaagttcatgagttaataacgcttaaactattg
aaaccgactgatgtcaaaatgaaattctacactgacatagatataaaagtgagaaacgag
tgggaaacatcggctacatccctagtcttctcatcagggcagtgggcaaaattgcacaac
actacgttcaatgaccgaacagcgagtgacgtcatggttatatacttgactatgcacagg
agagctgtcgcttataatgtggcattttatactccgttggtcgttctcgtcaccttcctt
ctcatgtcgttttggactcaaccattggtcatgtccagggtttggttctactcaggctgc
gcagtgacgatcagcttgggactgtgctatatagagtacataatgccgtgtcacaatgta
ccttccctgctggtgctgtatataacagtactgtttggagtactgttcgctctgctgcta
caagtggtgttgatgacgtcaattatcagagcgctgtgtgaaacgcaaccaattcagaat
cttctaacttcttacatgtttaggaagatatttttattaactccaatgacggtaacaaag
aactatgacacattaaacgaagggttttcctacgaaggtgaagattctgatgtaattatc
ccaagaactagcaatgtggaagagatggtggctgatgtgaccacagagaaggccacattc
ggagacccagaggaattggctgaagcattcgataaactcttgtttttcgtttactctttg
gcgtttgctgtcatgttagcgttacatttttaa
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