Amyelois transitella (navel orangeworm): 106135288
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Entry
106135288 CDS
T09957
Name
(RefSeq) ionotropic receptor 25a
KO
K05313
glutamate receptor, ionotropic, invertebrate
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atra04040
]
106135288
Ion channels [BR:
atra04040
]
Ligand-gated channels
Glutamate (ionotropic)
106135288
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
PMP1_2
Motif
Other DBs
NCBI-GeneID:
106135288
NCBI-ProteinID:
XP_013190999
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All DBs
Position
8:join(9162960..9163161,9163562..9163864,9163993..9164407,9164525..9164639,9164834..9165073,9165732..9166120,9169647..9169850,9170615..9170800,9172041..9172373,9176105..9176204,9176678..9176818,9177580..9177693)
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AA seq
913 aa
AA seq
DB search
MYIFKIENSLRDFKFVLVVINEENNALAEKAFEVAKEYVRRNPSLGLAVDPVIVVGNRSD
SKSFLENVCRKYNDMLSAKKTPHVVLDFTMTGVGSETMKSFTAALALPTISGSFGQAGDL
RQWRSLDGNQTKFLLQIMPPADILPESIRAVVSKQDITNAAIIFDELFVMDHKYKSLLQN
IPTRHVITPVKSFNKDDIKTQLRSLRELDIVNFFVIGSLRTIKNVLDAADENQYFGRKTA
WFALSLDKGDISCGCKDATIVYMRPTPDAQSRDRLGKIKTTYSMNGEPEITSAFYFDLSL
RTFLAIKSLLDSGKWPNDMKYITCDDYDGKNTPNRTLDLRNAFQEVKETPTYAPFFIPED
DPMNGRSYMEFNTDLSAVTVKDGASIGSRSLGSWKAGLSNPLSLTDPDNMSDYSAQLVYR
VVTVEQQPFIIKDDEAPKGFKGYCIDLIEEIRQIVKFDYEIVMAPDGNFGTMDENGNWNG
IIKELIEKRADIGLTSLSVMAERENVVDFTVPYYDLVGITILMKLPRTPTSLFKFLTVLE
NDVWLSILSAYFFTSFLMWVFDKWSPYSYQNNREKYKDDEEKREFTLKECLWFCMTSLTP
QGGGEAPKNLSGRLLAATWWLFGFIIIASYTANLAAFLTVSRLDTPIESLDDLSKQYKIQ
YAPLNGSSAMTYFERMANIEVRFYEIWKEMSLNDSLSDVERAKLAVWDYPVSDKYSKMWQ
AMKEAGLPNSIEEAVQRVRDSKSSSEGFAWLGDATDVRYHVLTSCDLQMVGDEFSRKPYA
IAVQQGSPLKDQFNNAILQLLNKRKLEKLKENWWTNNPNAMKCEKQDDQSDGISIQNIGG
VFIVIFMGIGLACITLGVEYWWYKWRKRSTIGDVTQVEPAKTTRNNENIGILKGEGFSFR
SKTLGLSNLKSRF
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtatatatttaaaattgaaaacagtttgagagatttcaaatttgttttagtggttata
aacgaagaaaacaatgcgttggcggaaaaggcttttgaagttgcaaaggaatacgtgagg
agaaatccgagtttgggattggcagttgaccctgttatagtggtcggtaaccgatccgac
tctaaaagttttctggaaaatgtttgcaggaaatacaatgacatgctttcggcaaagaaa
acgccgcacgttgtcctagatttcacaatgaccggggtgggttcggagacgatgaaatct
tttaccgcggcactggccctgcccactatttctggctcgtttggacaagccggtgatttg
cgacaatggcgttcgcttgacggcaaccagacgaagtttttactacaaatcatgccacca
gctgatatcctacccgaatccataagggcggtcgtctctaaacaggatattacgaatgcc
gctattattttcgatgagctatttgtgatggatcacaaatacaaatccctcctgcaaaac
attccgacgcggcacgtaattacaccggtaaaaagttttaataaagacgacataaaaacc
caactaaggagtttacgagagttggacattgtcaactttttcgtcatcggcagtttaagg
acgataaaaaatgtattagatgcagcagatgagaatcagtattttggaagaaaaaccgct
tggtttgcattatcgttggataaaggcgacataagttgcggttgtaaagatgctactatc
gtttatatgcgaccgacgccggacgctcaaagcagagatcgtcttggcaagatcaaaacc
acatacagcatgaacggggagcctgaaatcacctctgctttttacttcgacctgtctctg
cgcacgtttttagctataaaatcactcctggactctggcaagtggccaaatgacatgaaa
tatataacttgtgatgattacgacggcaagaatacaccaaacaggaccttggacctacga
aacgcatttcaagaggttaaagaaacaccgacgtatgcgccgttttttataccagaagat
gatccaatgaatggtaggagctacatggagtttaacacggatttatcggccgtgacagtc
aaagatggggcctcgataggcagccgatcattagggtcttggaaggctggtctctcgaac
cctttgtcgttgactgaccctgacaacatgagcgattactctgcgcagcttgtctacaga
gtcgtgacggtggagcaacaaccgtttattatcaaagatgacgaagctccgaaaggtttc
aaagggtactgcatcgatttaatcgaagaaatccgacaaatagttaaattcgattatgaa
atcgtgatggcaccggacgggaacttcggtactatggacgaaaacggtaattggaacggc
atcatcaaggagttgatcgagaaaagggcagatataggtctgacgtcactatctgttatg
gccgagagggagaacgtagtagatttcacagttccgtactacgatttagttgggatcact
atactgatgaaattgccaaggacgccgacctctcttttcaaatttctgacggttttggag
aatgacgtctggctttcaatactttctgcttatttttttacaagcttcctcatgtgggtt
tttgacaaatggagtccatatagctatcaaaataaccgggaaaagtataaagacgacgaa
gaaaagagagagtttactctcaaagaatgtctatggttctgtatgacgtcattgactcct
cagggaggaggggaagccccgaaaaatctgtcaggaagattgctcgcagcgacatggtgg
ctattcggattcataataatagcatcttataccgcgaatctggctgccttcctcaccgtg
tctagactggacactcccatagagtccctggatgacctctccaaacagtataagatccaa
tatgctcctctaaatggttcctcagccatgacgtattttgaaaggatggcgaatattgaa
gttagattttatgagatatggaaggagatgagtcttaatgacagtttgagtgacgtggag
cgagcaaaactggccgtgtgggactatcctgtcagcgacaaatacagtaaaatgtggcaa
gcgatgaaagaagccggacttccgaactccattgaagaagcagtgcagagagttagagat
tccaaaagttcaagtgagggcttcgcttggcttggtgacgctactgatgtgcgataccat
gtattgacgagctgcgatcttcagatggttggcgatgagttttcaaggaaaccgtatgct
atagctgtgcaacaagggtcgccgttgaaggaccagtttaacaatgcaatacttcaactc
ctcaacaaaaggaagctggagaaactgaaagagaactggtggacgaacaaccctaacgct
atgaaatgcgaaaagcaggatgaccagtctgacggcatctccatccaaaacattggcggg
gtgttcatagtcatcttcatgggcatcgggttggcctgcatcactcttggcgtagagtac
tggtggtacaagtggaggaagcgctccaccatcggtgacgtcactcaggtggaaccagca
aaaacgacgaggaataacgaaaatattggtattcttaaaggtgaaggattctcgttcaga
tctaaaactttaggtctttcaaacttaaaatctagattttaa
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