Amyelois transitella (navel orangeworm): 106135488
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Entry
106135488 CDS
T09957
Name
(RefSeq) heat shock factor protein isoform X1
KO
K09414
heat shock transcription factor 1
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106135488
Transcription factors [BR:
atra03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
106135488
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Vert_HS_TF
HALZ
TBCC_N
Motif
Other DBs
NCBI-GeneID:
106135488
NCBI-ProteinID:
XP_013191250
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Position
3:complement(join(7497559..7497740,7500093..7500165,7501944..7502015,7502678..7502783,7503591..7503659,7503923..7504472,7504567..7504768,7505663..7505860,7505931..7506386,7507820..7507924))
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AA seq
670 aa
AA seq
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MRSVVEIGASVPAFLGKLWKLVNDAETNHLISWSPGGKTFVIKNQADFARELLPLYYKHN
NMASFIRQLNMYGFHKITSVENGGLRYEKDEIEFSHPCFMRGHAYLLEHIKRKIANSKSI
VSSDSGEKILLKPELMNKVLADVKQMKGKQESLDAKFSAMKQENEALWREVAILRQKHIK
QQQIVNNLIQFLMSMVQPARAPQANNSNVGVKRPFQLMINNAAYNSGTDGYPGKLKNVKL
EKETLEELIDDNLEEGPTIHELAHDDILHNDASQESIDPEDYVTVGVPLVNSNVATEQSS
VDPANIQYQVTLEDGDDVESETPGTVFFPIVESTTTSSPTVTTPGSPEHIKYVVVSPGTS
KLKTRNTTKTSKPAQNIKSLVSSSNFNSMNPSADLKLPAEIFASDDSVSDAGVPVSDDIS
VQNLLNDIVSDSNPSSSFTKDKMLGGIKLDKANIKPVSKKAKKTTKNNTDYENLADIKTE
LQDGIDWSIATVNNNSNANRFQSRSRRDNNGISREELSSLCAPNTNKNDIDDHLDTMQSD
LESLKELLRSDSYSLDTNTLMGTAEASIGPMMSFAIPSCQPTTNPCLFGSDDPFYGLSYN
LNDRAKPSNSAEENQLISYTGNIPDFEDIDMPELEGDNSQEAVAAPSPCPSTLNTPQVEV
HSPATWKLKP
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctgtggtggaaataggtgcgagcgtcccagctttccttggaaagttatggaaa
ttagtgaatgatgccgagacaaaccatttgatttcatggagtcccggtggaaaaacattt
gtaataaagaatcaagcagattttgcaagggaactcttaccactctattataaacacaat
aatatggcaagttttatcaggcagttgaatatgtatggctttcacaaaatcacatcagtg
gaaaatggtggactgcgatatgaaaaagatgaaattgaattttcacatccatgttttatg
agaggtcatgcttatctcttagagcacataaagagaaagattgcaaattcaaagtcgatt
gtaagcagtgatagcggagagaaaattttgctgaaaccagaattgatgaataaagtgcta
gcagatgttaagcaaatgaagggcaaacaggagagtttggatgctaagttcagtgctatg
aagcaagaaaatgaggccttgtggagggaggtggccatacttcgtcagaaacatataaag
cagcagcaaattgtaaataacctcattcaatttctgatgtccatggtgcagccagctagg
gccccccaggccaataacagcaatgttggggtaaagaggccttttcagcttatgataaat
aatgctgcttacaattcagggacagacggttacccagggaaactcaagaatgtaaaactt
gaaaaagaaacattggaagagttaattgatgataacttggaagaggggcccactatccat
gaattagctcatgatgacattttacataatgatgcttctcaagaatcaatagatcccgaa
gactatgttactgtaggtgttccactggttaattccaatgttgctacagaacaaagttcg
gtggatccagctaatattcaataccaggtcactttagaggatggggatgatgtagaatca
gaaacaccaggaacagtgtttttccctattgttgagtccactacaacatcttcacccact
gtgactacaccgggatctccagaacatatcaaatatgtagtggtttcacctgggacttca
aaactcaaaactagaaacacaacaaaaacttcaaaacctgcacagaatataaagtccttg
gtgtcatcaagtaatttcaattctatgaacccttcagctgatttgaagctgcctgctgag
atttttgccagtgatgactcggtcagtgatgctggtgttccagtatcagatgatatatcg
gtacagaacttattaaatgatattgtatctgactcgaaccccagctcctcatttaccaaa
gataaaatgcttggaggaataaagctagacaaggcaaacataaaaccagtatccaaaaag
gccaagaaaacaactaaaaataacacagattatgagaacttggcagatattaagacagaa
ctccaagatggcattgactggagcattgcgacagttaacaataattctaatgcaaacaga
tttcaatccaggagtaggagggataacaacgggataagtcgagaggaactttcttccctc
tgtgcacccaatacaaacaaaaacgacattgatgatcatttggacactatgcagtcagat
ttggaatcactaaaggaacttttaagaagtgactcttactccttggacactaatactttg
atggggactgctgaggcgagcataggacctatgatgtccttcgccattccttcctgccaa
ccaaccacaaatccatgtttatttggatcagatgatcccttctatggactctcttataac
ttgaacgatcgggcgaagccgtctaacagtgctgaagagaatcagcttatctcgtataca
gggaatattccagactttgaagacatagatatgccagaactggagggtgataattcacaa
gaagccgtcgcggcgccttcgccctgcccttccaccttgaacaccccgcaagtggaggta
cactcgccggccacatggaagttaaaaccatga
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