KEGG   Amyelois transitella (navel orangeworm): 106135512
Entry
106135512         CDS       T09957                                 
Name
(RefSeq) negative elongation factor D
  KO
K15181  negative elongation factor C/D
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106135512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106135512
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     106135512
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 106135512
NCBI-ProteinID: XP_013191295
LinkDB
Position
3:join(6646668..6646727,6646814..6647039,6647308..6647417,6650031..6650138,6650748..6650897,6651044..6651174,6651829..6652016,6653195..6653435,6653752..6653962,6654307..6654447,6655109..6655238,6656363..6656394)
AA seq 575 aa
MPSQYEDERVWETSNHTQYEEEGGEDVIENPEEVLQECLEKFKTPDYIMEPGIFGQLKRY
FQAGGNPEQVIEQLSINYSAVAQMANLLAEWLILGGVKVTEVQAMVENHLKDMILKTFDP
KKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGEIT
SISTAAQQIEVFSRVLKSAIVGFLQSSDDWQNSVNECAKMVCHGAHTYVYSQVIVHILSQ
EPRGGAIMKRLSQEITRCAQQSGHDVTPITLALTAGESWRSARTALAAMLSRGALNPADI
SALFRAYTQPDPPPVHLLRIPQFLELLVDSLFKLGSKLNPEHKSKYMYLLAYSASVCEGA
TPGRPVKDELKATVQAIEKVHAVCSSSASSSELIAELPTLYHCIRFPVVGMGVLVWVECV
VTEPSYFKLCTEHCPVHLALLDEVASCHQLLHHRLLKLLVQLFESPQDELEILVQLELKK
MLLDRMVNLLSRGCVVPVLRYIKQCWQRGDTDISLIRYFITEVLDAIAPPYTPEFVQLVL
PMVENEEITGTMRAEGENDPVSEFIVHCKAHYFVS
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgccaagtcaatacgaagatgaacgggtttgggaaacatcaaatcacactcagtatgag
gaggaaggtggagaagatgtcatcgagaatcccgaagaagttcttcaagagtgtttggag
aaattcaaaacaccagattacattatggaaccaggaatatttgggcagctcaaacgatat
tttcaagctgggggcaatccagagcaagtgatagaacagttatccatcaattacagtgct
gtagctcaaatggctaacttgttagcggagtggcttatattaggaggtgtaaaagttact
gaagtccaggcaatggttgaaaatcatttaaaagatatgattctaaaaacatttgaccca
aagaaagcagatactatttttaccgaggagggtgaaacaccagcctggttaactgaaatg
attgaacatcccacttggaggtccctcatttatagactggcagaagagtatcctgattgt
ctaatgttgaacttcactataaagttgatatcagatgcaggttttcaaggggaaatcact
agcatatctactgcagcgcaacaaattgaagtattctccagagttcttaaatctgccata
gtaggattccttcaaagttcagatgattggcagaacagtgtaaatgaatgtgctaaaatg
gtgtgccatggtgcacatacttatgtatacagtcaagttatagtacacatattatcccaa
gaacctagaggtggagccataatgaagagattgagccaggaaattactcggtgtgctcaa
cagagcggtcacgacgtgacgcccatcacgctggcgctgacggcgggcgagtcgtggcgg
agcgcgcgcacggcgctcgccgccatgctgtcgcgcggcgcgctcaaccccgccgacatc
tccgcgctgttccgcgcctacacgcagcccgacccgccgcccgtgcacctcctccggata
ccgcagttcttggaacttctagtcgactcactgtttaagttaggcagcaaattgaatcct
gaacacaaatcaaagtatatgtacctcctggcgtattccgcgagtgtctgcgaaggcgcc
acccctggccggcctgtgaaggatgaactgaaggcgaccgtccaagccatagagaaggtc
cacgctgtgtgcagtagctctgccagttctagtgagctgatagcagagttgccaacactc
taccattgcataagattccccgtagtcggcatgggcgtgcttgtatgggtggagtgcgtc
gtcacggaaccatcttatttcaagctgtgcacagaacactgtcccgtccacttggcttta
ctagacgaagtagcttcgtgccaccaacttcttcaccacaggctactcaaattattggta
cagctttttgaatcgccacaagatgaactggaaattttagtacagctggaactgaaaaaa
atgcttctagaccgtatggtgaacctgctgagtcgaggctgcgtggtacccgtactgcgt
tacatcaagcagtgctggcagcgcggcgacactgatatctcgctgataagatacttcatt
acagaggtactagacgcaattgctccgccatatactcccgaatttgtccaacttgtattg
cctatggtcgaaaacgaagaaatcacaggtaccatgcgggctgagggcgaaaacgatcca
gtttcagaattcatagttcactgcaaagctcattattttgtaagttaa

DBGET integrated database retrieval system