Amyelois transitella (navel orangeworm): 106135597
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Entry
106135597 CDS
T09957
Name
(RefSeq) nuclear pore complex protein Nup58 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106135597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106135597
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106135597
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
MscS_porin
Motif
Other DBs
NCBI-GeneID:
106135597
NCBI-ProteinID:
XP_060806272
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All DBs
Position
21:complement(join(5082875..5082957,5083432..5083515,5085589..5085720,5086578..5086736,5087533..5087676,5088477..5088627,5089868..5089998,5090527..5090604,5091145..5091195,5092243..5092407,5092690..5093075,5093225..5093301))
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AA seq
546 aa
AA seq
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MSFSFGTPSSAPANTGLSGGFNFAAKPATPGFGLTATTQASTGLFGTPATSAPAFGSTGF
GATTTPKFGTTPTLGATPAFGTTPALGSTPAFGTTPALGSTPTFGTTPALGTAFGTTPAL
GTTPAFGTTPALGTTPAFGTTSTAPTFGTGAPAFGATTTSAFGTTNTLGTGLGGGGLGGT
GLGGGGLGGGGLGGGLNFGTGSTLSAPSTGLNLGTTSVTGTQPTTLVTPSLGLGGVAATT
TGIGAANATDAKTEPPKQTKLPNEISTTVDSFKEFVKKQKSLSSEVMRVSIKPLHKVSRE
AESTLRLALSLSGEVNKARAQARRLRAGAAAALAAADGAARDHHTPGLELESPAPPPYVK
DLVAELEQQLITFRRQMDVADKQMQAEPKLLTEQELTLGIRRMHESLVALAGRLQTVHSQ
VEAQKEQYLNLRKYVLKDPSNVFETRSYSTSLDQILKDAESSKKKTKTSHFGQSSDVSYG
SAVLSDPRAALGNIQQLAGPTPFNYVANTISTFPTADTSGPGWQPAAAPAPPSFQLQKPP
GKRGKQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctcattcggtaccccgtctagtgctcccgccaacaccggactttcaggaggt
tttaattttgctgctaaaccagcaacgcctggattcggcttaacggctacaacacaagca
tcaacaggtctctttgggacccctgctacttctgcgcctgcatttggctcaacgggattt
ggggcaacaactacacctaagtttgggactaccccaacgctgggtgccacacctgcgttt
ggtactactccagccttgggttctacgcctgcatttggtactaccccagcattgggtagt
actcccacgtttgggactactccagcattgggaactgcatttggaaccacacctgctcta
ggcaccaccccagcttttggaactaccccagcactgggcacgactccagcctttgggact
acttcaactgctcccacattcggtactggagccccagcatttggtgcaacaaccacctct
gcatttgggactacaaatacccttggcactggtttaggaggcggagggcttggtggcact
ggtctcggaggtggaggacttggaggtggaggattgggtggtggactgaattttggcact
ggctcaaccctatcagcgcctagcactggtttgaatttaggaacaacttcagttactggt
acacagccgacaactttagttactccaagcttgggccttggtggtgtcgctgcaactact
acaggcattggggcagcaaatgctactgatgcaaaaactgagcccccaaagcagactaaa
ctgccaaacgagatttcaaccacagttgactcattcaaagagtttgtgaagaaacagaaa
tcactcagttctgaagtcatgcgggtgtctatcaaacctcttcataaggtgtctcgagaa
gcggagtccacactacggctagcgctgtcgctgagcggcgaggtgaacaaggcgcgtgcg
caggcgcgcaggctgcgggcgggcgccgcggccgcgctcgccgccgccgacggcgccgcc
cgggaccaccacacgccaggcttagagctagaaagtcccgctccgccgccgtacgtgaaa
gatttagtggcggagttagaacaacagctgatcacgttccgacggcagatggacgtcgcc
gacaagcagatgcaggccgagcccaagctgctcactgaacaagaactgacattgggtatt
cgtcgcatgcacgagtctctagtggcgttggcagggcgtctgcaaacggtgcattcccaa
gttgaagctcagaaggaacagtacctcaatctgaggaaatacgtgctcaaggaccctagc
aacgtgtttgaaacgcgctcttatagtacaagtctcgaccagatcctgaaagacgctgaa
tcttcaaagaagaagaccaagaccagccacttcggccaatcgagtgatgtctcctacggc
agtgcggtgttgagcgatcctagagcagcgcttggcaacatacaacagttggcgggccca
actccattcaactacgtggcgaacaccatatctactttccccactgcagatactagcggc
cccggctggcagcccgcggccgcgcccgcgccgcccagcttccagctgcagaagccgccc
ggcaagcgcggcaagcaatga
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