KEGG   Amyelois transitella (navel orangeworm): 106135686
Entry
106135686         CDS       T09957                                 
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106135686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atra03400]
    106135686
DNA repair and recombination proteins [BR:atra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     106135686
SSDB
Motif
Pfam: XRCC1_N BRCT_2 BRCT PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 106135686
NCBI-ProteinID: XP_013191504
LinkDB
Position
15:complement(join(3666929..3666956,3667259..3667389,3667804..3667997,3668568..3668795,3669197..3669405,3670258..3670426,3670853..3671491,3671837..3672038,3672616..3672774,3673050..3673136,3673438..3673548,3673866..3673916))
AA seq 735 aa
MPRVKIDYVASFSSEDPDHPASNLLSWEVSKKRWLCRPGESSCSVVLQLSRSVQISSIQI
GAYHAAVVEVLVGRSETPNDPFEVLVPSSVFLTPAESRREPQDRVRSFSGDQLSNTSQHW
DRIRVVCRQPYNKQCKYGLSFIQIYEPESGPTAPKAPSPVPLAASRAIAASTQFGHSSSD
EEDYRPGQLFAALRASPGTSTNTGGQIRQATSQILKNISDTSTKIVKSPIVKNTSSSNKQ
NVLETTANRHRDNLLYDDEELPHSKIDSVVQRHNDVKSKEKDAKDAKEKLLKEKERDKKR
NERATKDDRGATGSDNNASQNKRKDDHNVSKNERNKKDETLNDQFKYKNRDDKTKRDDGL
KNDRNIQKNRHNDSTVKPGRSDENDSTDRNRTTSNKVKNDHDGNRKTAKKRARDDAGELR
AGPVSSSPHTLLSRAALVLSGYVHPRRARVRAAAAALGAAVLHDWGPGATHLICAFPNTP
KLRQALASDPSTPIATGEWVEKCCELRRLLPWQWFATEPARRVPMPDLDTLTDDNDEKEC
DEECDTDDEIERVLRDQKKRRRSNTPETQADKSRDVSSDVEFVRDERIKGNLTVHDSDSD
RTVDASRLDDDDVLEDLGATKNIEEDGNVTDPEPDASPGRKHEPLPNFLDGYTFYVDPDV
TSAGLDVELLKRYVRAYGGVLIEEWSEADGPVDYVLCAESSAVGGKCVRADWLWRCHSER
RLCDSKRYLIRAADT
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgccccgcgtgaagatcgactacgtagctagcttcagtagtgaagacccggatcatcca
gccagtaacctcctgtcttgggaagtgagcaaaaaacgctggctatgccgccctggggaa
agcagttgttctgtagtgctgcagctctcgcggtcagtccagatatcatctatccagata
ggtgcatatcatgcagctgttgtggaagtgttagtaggaaggtctgaaacacccaatgac
ccatttgaagttttggtcccaagtagtgtattccttacaccggcagagtcccgaagggag
ccccaggatcgcgtgcggtccttcagtggagaccaactctccaatacctcccaacactgg
gaccgcatccgtgttgtttgtcgccaaccttacaacaaacagtgcaagtatggcctatca
tttattcaaatttacgagcctgaaagcggtccaacggctcctaaggctccttcaccggta
cctctagccgcgtcccgtgcaatagcggccagtactcagttcggtcacagctcgtctgat
gaggaagattaccgccctggacagctgttcgccgctttacgagcatctcccggtaccagc
actaatactgggggtcaaatacgacaagctacttcacaaatactaaaaaacattagtgac
acatcaacgaaaatagttaaatcaccaattgttaaaaacactagttcttctaataaacaa
aatgtcttagaaactactgccaatcgccatagagacaacttgctgtatgatgatgaagaa
ctaccgcatagtaaaatagattctgtagtgcaaagacataatgatgttaaatctaaagaa
aaagatgctaaagatgccaaagaaaaacttttaaaggaaaaggaaagggataagaaacga
aatgagagggcaacgaaagatgatcgtggagctactggtagcgataataatgctagtcaa
aataagagaaaagacgatcataatgtaagcaaaaatgaaagaaataaaaaggatgaaact
ctaaatgatcaatttaaatataaaaatagagatgacaaaacaaaacgtgatgacggtttg
aaaaatgatcgtaacatacaaaagaacagacacaatgacagtacagtaaaacctggtaga
agtgatgaaaatgattcaacagataggaataggacgacatctaataaggttaagaatgat
catgatggaaacaggaagacggctaagaaacgagcgagagatgatgcaggcgaacttcgc
gccgggcctgtgagcagcagcccgcacacgctgttgtcgcgcgcggcgctggtgctgagc
gggtacgtgcacccgcggagggcccgcgtgcgcgccgccgccgccgcgctgggcgccgcc
gtgctgcacgactgggggcccggggccacacatctcatttgcgccttcccaaatacgcca
aagctacgtcaagcgctggccagcgatccgtccactcctatagccaccggagagtgggtg
gagaagtgttgcgagttgcggcgactgttgccgtggcagtggttcgcgactgaaccagcg
agacgtgttcccatgccagacctcgacacactgaccgatgacaatgatgaaaaggagtgt
gatgaagaatgcgacactgacgatgaaatcgagagagtactccgcgaccaaaagaaacga
cgcaggagcaacactccagaaacacaagcagacaagtcacgggacgtttcgtcagatgtc
gagttcgtaagagacgagaggataaaggggaatctgacggtgcatgacagcgacagcgat
aggactgttgacgcctcacgattggatgatgatgatgtgttggaagatttgggtgctacg
aaaaatatcgaagaagacggcaacgtaacggatccggaaccagacgcgtctccgggtcgg
aaacacgaaccgcttccgaatttcttggacggatacacattctatgtagaccctgacgtg
acatcagctggactcgatgttgaactgctcaagagatatgtacgagcgtacggcggcgtt
cttatcgaagaatggagcgaagccgacgggcccgtagactacgtgctgtgcgcggaatcg
tcagcggttggcgggaaatgcgtgcgcgctgattggctgtggcgctgccattccgagcgt
cggctgtgtgactccaaaaggtacctgataagggctgccgatacgtaa

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