Amyelois transitella (navel orangeworm): 106135722
Help
Entry
106135722 CDS
T09957
Name
(RefSeq) HMG box transcription factor BBX
KO
K21643
HMG box transcription factor BBX
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106135722
Transcription factors [BR:
atra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106135722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106135722
NCBI-ProteinID:
XP_013191543
LinkDB
All DBs
Position
15:join(4472965..4473089,4473402..4473483,4473568..4475019)
Genome browser
AA seq
552 aa
AA seq
DB search
MHEQDGDGEPAHHARRPMNAFLIFCKRHRSVVRDKYPNLENRSITKILGEWWANLDKEDK
ACYTGLAKQYKDAFLSANPDFKWYKLPAPPLRTLSSRPREPTEKPNEFPNIAYHETELEK
TNNNSTKVDLNKKPNEVVPEDDQKRLSMFTPGKLADEAHMGGLSSLLATKTETQTPNPYY
SPPNFKYNAISTSNDYRSQSILETSKTKGLSREENIRELQNALTETSKIFEEEFDDGTGK
VHRYGHGVSNDQFTNQDVIDQIVDKRYSKDDDNYMKNWSDDEKNSRAGRSCKGKRYQEFM
AVGGLIVNKRQKRDHYDKMPDEEYNASCSWESNNSHGEESAVAEEPVQDSSVNDTSNENE
IKHETPDTSEPDNNTNKTFKAADFDLDAKIRALPSLSLEKFQQKKRENKRKKKSAGLKSK
NVEPVDRIINAVPRSFLDDRREMVESWREHVIGSQKRKPRKVSITRLDFNSMAASMEMKE
SHKISPEIKLATEAPCTVLQSMELCKQPPHSHVDLLALATLAEVAANKSKIEESSMIDTM
TAKASEENASMV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagcaggacggcgacggggagccggcgcaccacgcgcggcggccgatgaacgcg
tttctcatcttctgcaaacgacacaggagcgtcgtgcgcgacaagtatcctaacctcgaa
aataggtccattaccaaaattcttggagaatggtgggctaacttggacaaagaagacaaa
gcttgctatacaggtcttgctaaacagtacaaagacgccttcctcagtgccaaccccgac
ttcaaatggtacaagttacccgcaccgcctctccgtacactttcctcccgaccaagagaa
ccgactgaaaaaccaaacgagttccccaatatcgcctaccatgaaacagaactcgaaaaa
accaacaacaattccactaaagttgacctcaataaaaagccaaatgaagtcgtgcccgaa
gacgatcagaaacgattgtcaatgttcacgcctggcaaactggcagatgaagcccatatg
gggggcttaagtagcctcctggcaacgaagactgaaactcaaactccaaatccatactat
tcacctccaaactttaaatacaatgcgatctcaacctcaaacgactacagatctcaaagc
atattggagacgtccaaaacaaaaggtctttccagagaggaaaatatacgggaactacaa
aatgctcttactgaaaccagtaagatatttgaagaagagtttgatgatggaactggtaaa
gtacataggtatggacatggtgtttcaaatgatcaattcaccaatcaagatgtgatagac
caaatagttgataagagatactctaaggatgatgataattacatgaaaaactggtcagac
gacgagaagaattcgagagctggcaggtcatgtaagggaaaaaggtaccaagagttcatg
gctgttgggggactgatagttaataagaggcagaaacgagaccactatgataaaatgcca
gacgaggaatataacgcatcttgtagttgggaatccaacaattcacatggcgaagaatct
gcggtggccgaagaacctgtgcaagacagttcagtgaacgacacgtcgaatgaaaacgaa
ataaaacacgagacaccagacacatccgaaccagacaataacacaaacaaaacattcaag
gctgccgacttcgatttagatgctaaaattagagccttaccgtctctcagtctagaaaaa
ttccaacagaagaagagagaaaataaacgcaaaaagaaatcagctggtctgaaatctaag
aatgtcgagccagtggaccgaattataaatgcagtccctagatcgtttttggatgatagg
cgagaaatggtagaaagctggcgggagcacgtgatcggtagtcagaaacgaaaaccgagg
aaagtgagcatcactaggctcgattttaacagtatggcggctagcatggaaatgaaagaa
tcgcataaaataagccccgaaatcaaattagctaccgaagcgccttgcaccgttcttcag
agtatggagttatgtaaacagccgccacacagtcacgtagatttactggctctggcgact
ttagccgaagtggctgcgaacaagtccaaaatagaggagtcctcgatgatcgacacgatg
accgccaaagcgagcgaagaaaacgcttccatggtatga
DBGET
integrated database retrieval system
