Amyelois transitella (navel orangeworm): 106135869
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Entry
106135869 CDS
T09957
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03015
mRNA surveillance pathway
atra04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106135869
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106135869
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atra01009
]
106135869
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106135869
03036 Chromosome and associated proteins [BR:
atra03036
]
106135869
Protein phosphatases and associated proteins [BR:
atra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106135869
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106135869
Chromosome and associated proteins [BR:
atra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106135869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy_6
Motif
Other DBs
NCBI-GeneID:
106135869
NCBI-ProteinID:
XP_060807111
LinkDB
All DBs
Position
24:complement(join(2168023..2168250,2168626..2168839,2169806..2169942,2170725..2170913,2171336..2171507,2171894..2172245,2173163..2173304))
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AA seq
477 aa
AA seq
DB search
MGDTTTEIQPEDSANNNVPAEPKSEEKDDKLNNELKKRLRRYIKKLDESDTSVTKEESEK
IEIETFKQLYKPPLDANQESYNKIPKFYFKLPRSDEVLNQKLREETRAQFLQKKSKELLD
NSELKHLWGLIEKSNGSYSMANNHELTIDYFQFRKIRDEAGPKYRPYFTAEVFGRLQAAE
GGVGRVRGVSLFNYVMRRVWLQQTRIGLSLYDVTGQGYLTEHDLESYIAELVPSLAALDG
LDSSFSSFYVCTAARKFLFFLDPLRVGRVRIRDVLSCSFLDDLLELREEDLPMELQEQNW
FSAASALRVYGQYLNLDRDHNGMLSINELAGYGSGTLTRAFLQRVFQQCLTYDGEMDYKT
YLDLVLALENRRQPAALAYLFRVLDINSQGYLDAFTLNYFFKAIQEQMVAHGAEPVNFED
VKDEIFDMIRPVHPARITLNDLIKSGHGHTAVSILLELHGFWAYENREALAAADHSA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacacaactaccgaaattcaacccgaagacagtgcaaacaacaacgtaccagca
gaaccgaagtcggaggaaaaagacgataaattaaacaatgaactaaagaaaaggctacga
agatacataaagaaattagacgaatcagacacaagcgtaacaaaagaggagagtgagaaa
atagaaattgaaacgttcaaacagctgtacaaacctccattggacgccaatcaagagtct
tacaacaaaatacctaaattctacttcaaactaccccgcagtgacgaggtactcaatcag
aagcttagagaggagaccagagctcagttcttgcagaagaaaagtaaagaattactggat
aatagtgagttgaaacatctgtgggggttgattgagaaatccaacggtagctacagtatg
gcgaacaaccacgagctgactatagactatttccagttcaggaagattagggacgaggct
ggacctaaatataggccatacttcacggcagaagtgtttggtcgcttgcaagcggcggag
gggggtgtggggcgggtgcggggggtgtctctcttcaactacgtgatgaggagggtgtgg
ctgcagcagaccaggatcggtttgtccctctatgacgtcacggggcagggatatctcact
gaacatgacctggagagctacatagcagaactagtgccttccctggcggcattggacggc
ctggactcgtcgttcagctcgttctacgtgtgcacggccgcgaggaagttcctgttcttc
ctcgacccgctcagggtcggccgcgtgaggatcagagacgtgctgtcgtgctccttcctc
gatgatctgttagagcttcgcgaagaagaccttccgatggagctccaagagcagaactgg
ttcagcgcggcgtcagcgctgcgggtgtacgggcagtacctcaatctggacagggaccac
aacggaatgctgagcattaatgaattagccggttacggctcgggcaccctgacccgcgcg
tttctccagcgtgtgttccaacagtgcctcacgtacgacggcgagatggattacaagacg
tatttggacttagtcctggcgctggagaacaggcggcagccggcggcgctggcgtacctg
tttcgtgtgctcgatatcaattcccaaggatatttggacgcgttcactctaaattatttt
ttcaaggcgatacaagaacaaatggtggcccacggcgccgagccggtcaactttgaggac
gtgaaagacgaaatattcgacatgatccggcccgttcatcccgcgagaataactctcaac
gaccttataaaaagcggtcacgggcatacggcggtgtccatattgttggagttgcacggg
ttttgggcgtatgagaatagagaagctttggcggccgcggaccacagcgcttga
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integrated database retrieval system
