KEGG   Amyelois transitella (navel orangeworm): 106135915
Entry
106135915         CDS       T09957                                 
Name
(RefSeq) uncharacterized protein LOC106135915 isoform X1
  KO
K14323  protein CASC3
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03013  Nucleocytoplasmic transport
atra03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106135915
   03015 mRNA surveillance pathway
    106135915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106135915
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106135915
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 106135915
NCBI-ProteinID: XP_060807270
LinkDB
Position
24:complement(join(1655107..1655294,1656648..1656736,1657136..1657248,1657896..1657994,1658842..1658903,1659509..1659593,1660323..1660391,1661036..1661118,1661242..1661424,1661823..1661922,1663309..1663396,1664417..1664536,1665657..1665800,1666706..1666837,1668812..1668906,1669692..1669836,1673082..1673182,1676142..1676219,1676517..1676606))
AA seq 687 aa
MTSVARRQEQDDSGEYSDASQDVEHSNSGNDGGQHESDYDSQGSESDHSERDPENQETER
RVDDDEDRSNPQYIPKRGTFYEHDDRTAASGEETTNTTSETPSEKKEGSETPAERRRPPR
KSDVINKWSHDKYNENEQMPKSRDELVAIYGYDIRNEDAPPHARRNRRYGRGPNKYTRTW
EDEEAYRRQNAQAQPRKPPNPEDFPELDSANKYSNKKRPPRPRSKSQPPSNESSENGSQQ
LRRNASIKTPKAKTERPKPNNRVVANNNNNNNNSKPTAKQPTKEKLPAIENLTITATVFN
NSQGQNQRKVNTVAQQRPVPTDQRKPAPKPQQNQPPSNSAPNKSPPQTAQQKPTAQQNNQ
PPASGPESRGGSKRYSSLRQRPLAETYSPQQQQQQQTQQQQQSQQLPAPQQQQQQQPQQQ
PIRYNEYPANSQSGTQHQGSPVPQIHPQQLIHQQVHRGAQPHGPSPPHALPAHAQQVRLG
IMEQQQLVSHPHHQLHNMPQPHTMGQLQPAQGYAPPAMMPAQYMQPPSQTGNSGVMCSPL
YPQPTPPYPHQVYPHHNYATQAGGVTYYSCAEQEQLPRAQRRPTAAIPIVRPHTDRPANS
SEKDNIDRIVENMFVRKPWPATHGADSKEKPQTENRSSQEPQSKESSQPNSLTSSSISTD
SKPSENKEVEEPKEVEQKDDESITTDA
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgacgtccgtggccaggagacaagaacaagatgactctggcgagtattctgatgcttct
caggatgtcgagcacagcaactcgggaaacgatggtggtcagcacgagtctgattatgac
tcgcaggggagtgagtctgaccactctgagagggatccggagaatcaggagaccgaacgt
cgtgtggatgacgacgaagaccggagcaacccacagtacataccgaaacgcggtactttc
tatgaacatgacgaccggactgcggccagcggtgaagaaaccactaatacgacatcggag
acgccctcggagaagaaggaaggcagcgagacgcccgccgagcgccgccgccctccgcgc
aagtctgacgtcataaacaagtggtcgcatgacaagtacaatgagaacgaacagatgccg
aagtctcgcgatgagctggtagctatatacggctacgatattaggaatgaggatgcaccg
ccccatgctagacgtaataggagatatggccgcggccccaacaagtacactcgcacttgg
gaggacgaggaggcatacagacgccagaatgcgcaggcgcagccgaggaagccgcccaac
cctgaggatttccctgaacttgactccgctaataaatatagcaacaagaaacggccgccc
cgcccccgctcgaagtctcagcctccttctaacgaatcatcagagaacggttcccagcag
ctgaggagaaacgcttccatcaagactcctaaagctaaaactgaaaggcctaagcctaac
aacagggtcgtcgctaacaacaacaacaacaacaacaacagtaagccaacagcgaaacag
cctaccaaagagaagttgcccgccatagagaatttgacaattaccgctaccgtttttaat
aacagtcaaggtcaaaaccagcggaaggtcaacactgtggcccagcagcggcccgtgccc
acggaccagaggaaaccggcgcccaaaccgcagcaaaaccaaccgccgagtaactccgcc
ccgaacaaatccccaccacagacagcacagcaaaagcctacagcacagcagaataatcaa
ccacctgcttcagggccagaatcccgcggtggcagcaaacgctacagcagcctgcgacaa
cggccattggccgagacgtactcaccgcaacaacaacaacagcaacaaacgcaacaacag
caacaatcgcaacaactgccggccccgcaacaacaacaacaacaacagccgcaacaacag
ccgattagatacaatgagtacccggccaattcacaatccggaacgcagcaccaaggcagc
cctgtgccgcagatacacccgcaacagcttatacaccagcaggtgcaccgcggcgcgcag
ccgcacggcccgtcgccgccgcacgcgctgcccgcgcacgcgcagcaggtgagactagga
ataatggagcagcaacaactggtctcacatccacatcaccagctgcacaatatgccgcag
ccgcacacaatgggacaattacaacccgctcaaggctacgccccaccagcgatgatgccg
gcgcaatatatgcagccgccatcacaaactggaaacagcggcgtgatgtgcagcccactg
tacccgcagcccacgcctccttacccgcatcaagtgtacccgcatcataactatgcgacc
caagccggtggagtgacatattacagttgcgcggaacaggagcagctgccaagggctcag
cggcgaccaaccgccgccattcctattgtgcggccgcacactgacaggccggcgaattca
tcagaaaaggacaatatagataggattgttgagaatatgttcgtgaggaagccatggccc
gccacgcacggcgctgattccaaagagaaaccacagacagagaaccgcagttcccaagag
ccacagagcaaagagtcgtcacaaccgaacagtttaacgtcgagctcaatttccacagat
tcaaaaccctccgagaataaagaggttgaggaaccgaaagaggttgaacaaaaagacgac
gagagtatcacgacggatgcctga

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