Amyelois transitella (navel orangeworm): 106136042
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Entry
106136042 CDS
T09957
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 3 isoform X2
KO
K11986
ubiquitin carboxyl-terminal hydrolase 3 [EC:
3.4.19.12
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atra01002
]
106136042
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atra04121
]
106136042
Enzymes [BR:
atra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106136042
Peptidases and inhibitors [BR:
atra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106136042
Ubiquitin system [BR:
atra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106136042
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
106136042
NCBI-ProteinID:
XP_013191933
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All DBs
Position
16:complement(join(3239341..3239500,3239889..3240038,3240616..3240758,3241604..3241735,3250492..3250606,3251368..3251513,3253324..3253677,3253872..3254208,3254717..3254861,3256269..3256359))
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AA seq
590 aa
AA seq
DB search
MECTHLLDNVKLDTEFNVEDTIITKNFSCSECAVKEQNWLCLQCGAVNCGRYVNGHAKLH
AESTEHQLCMSCDVYSVYCYKCDDYVANDTEQQTIDKIRQSIMQTRTDNGADENSNIEQI
EENSKEGSDGGNSSISDTSNAVSEMPVSPNGVKEGDRSPDVTPSSSFSNISGIADNATPE
TIESKSSKGAKTTEEKVRSLRPRSRKRSHSGDSSSAENSQTGRSKEKKPSTCNGKSQREK
KVVGLKNLGNTCFMNAVLQSLNNIQEFSCYFSQLPSLEVKTNGRQKVYHSRSYTRQEMHD
VVMAEELRKVLINLNSGCGSKAAISPECLFLVIWKVVPRFRGYQQQDAHEFLRYMLDRLH
TELLQLLPPDRDSGFVSRTPSASIVTAVFGGTLQSEVRCLACGTESKKFDPFLDLSLELP
EVGRHDAPVALTDCLTSFVQVEELADTERYFCSSCKCKQKSTKQFWIRRLPNVLCLHLKR
FRWHNYFRTKVDTAISFPLRALDMSGFVPRGSNVHTRRSNPHNQLYDLAAVIVHHGSGAG
SGHYTAFAINSSSWFHFNDHTVRPTNAEAVASCKPYILFYIRQEPTLPQS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtacgcatttgttagataacgtcaaattggacaccgaattcaacgtcgaggac
accataatcacaaagaacttcagttgttcagaatgtgcagtaaaggaacagaactggctg
tgcctgcaatgcggggcagtgaattgtggccgatatgtcaacgggcatgccaagttacat
gcagaaagcactgagcaccagttgtgcatgagctgtgatgtttattcagtctactgctat
aaatgtgacgactatgtagcgaacgacacagaacaacaaacaatagataaaataaggcaa
agtattatgcaaactagaaccgataatggggcggacgaaaatagcaatattgaacaaatt
gaggaaaacagcaaggaaggtagcgacggtggaaatagttctatatctgatacatcgaat
gctgtaagcgaaatgcctgtgtcgcctaacggtgtaaaagaaggggacagaagtcccgac
gtgacaccgagtagttcttttagtaatatatctggtatagctgataatgctacgccggaa
accattgaaagtaaatcttctaaaggtgctaagaccacagaagaaaaagtccgtagctta
agaccacgttcacgcaaaagatctcattctggagacagcagttccgcagaaaactcccag
accggcaggagtaaggaaaagaagccctccacgtgcaatggcaagagccaaagagaaaag
aaagtcgtaggattaaaaaatttaggcaacacatgtttcatgaatgctgtgctgcaaagt
ctgaataatatacaggaatttagctgctatttcagtcagctgccctctttggaggtaaag
actaacgggcggcaaaaagtttatcattcaagaagctatacgagacaagaaatgcatgac
gttgtaatggccgaagaattgagaaaggttctaatcaacctgaacagcggttgcggctcg
aaggcggccatatctcccgagtgcctgttccttgtgatctggaaagtggtgcctaggttc
aggggttaccagcagcaagacgcccacgaattcttgcgttacatgcttgacagactacac
acggagttgctacagttgctgccgccggaccgggacagtgggttcgtatcccggaccccc
tcagcctccatcgtcacggccgtgttcggaggcactctgcagagcgaggtgcgttgcttg
gcgtgcggcacggaaagcaagaagttcgacccgttcttggacctgtcgctggagttgccc
gaagtggggagacacgacgcgcccgtggccctcaccgactgtctcaccagcttcgttcag
gtggaagagctagcggacacggagcgttacttctgcagcagctgcaaatgcaagcagaag
tccaccaagcagttctggatccgtcggcttccaaatgtcctctgtcttcatcttaaacgg
ttccggtggcataactatttcaggaccaaagtggacacagcgatatcgttccccctgcgt
gcgttagacatgtccggcttcgttccccgcggtagtaacgttcatactcggcgctccaat
ccacacaatcaactttacgatctcgccgctgttatcgtacaccacggatcgggcgctgga
tccggccactacaccgcattcgctatcaactcttcatcgtggttccatttcaacgaccac
actgtccgaccgaccaatgccgaagcagtcgcctcgtgcaagccgtacatactgttctac
atccggcaggaaccaaccctgccgcagtcgtga
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