Amyelois transitella (navel orangeworm): 106136056
Help
Entry
106136056 CDS
T09957
Name
(RefSeq) rho guanine nucleotide exchange factor 7 isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106136056
Membrane trafficking [BR:
atra04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106136056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
RhoGEF67_u2
PH
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
106136056
NCBI-ProteinID:
XP_060803046
LinkDB
All DBs
Position
2:complement(join(7027094..7027539,7029266..7029466,7029843..7030110,7033741..7033953,7036318..7036539,7036920..7037118,7037411..7037629,7038020..7038182,7038509..7038692))
Genome browser
AA seq
704 aa
AA seq
DB search
MSSENCLVKAIYSFKGKNNDELCFKKGDIITVTQKEEGGWWEGTLGETTGWFPSNYVTEY
KDPTGSVTTSPIRAVSEIQAFRNVVLKDIIDSEKAHVAEMQGLVSNFLLPLEKSDMLTMD
EFKQLTGNINEVLQIHEQFLSLLEDCATKTGPDQRVGGLFLQWAPKIKSVHQTYCAGHPK
AVCILDKYKEELNTWMESAGAVCPGVLVLTAGLSKPFRRLGKYPAMLQELARHVHEAHPD
RGDTHRASVVYKDIASACTALRRQKELELQVVTGEVRGWPGGELSALGDVLHMGSVAVGP
SHQDRYLVLFPSSLLLLSVSKRVSAFVYEGCLPLTGITVAKLDDTETRKNAFEISSPMID
TIVAVCQTKAEADNWVSLLQKHSNTSSPAHEPGQPQSLPHMTMSDSNNSDLSSGLSSHKR
SHSFNNHQSYTQHTQQTQKNKQKNHSARWLLNSCDALDQSPAKSNKSPIGKKFSSVDFID
TSGSNYSNKGWSITCLRPAPPLRPQSFTVGSDENIGPTHPYAPHQRKSNSYEEDALILKV
IEAYCTSARCRNAVSSVDCGHFSVGKVQYHAPATNKLHYNYTKLPIVQRSETPEQQGCSR
SSKIKRNKSSSAADAYLYRGPETRRLLSERKFHLNRSNPNLWECSEERKPKLICGRERRS
GSHPSLAPLRVQPAPAPAPSRSARSSTWCCGTFVKQLTKSHHFD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgaaaattgtttggtaaaagcaatttattcatttaaaggaaaaaataatgat
gagctctgcttcaaaaaaggagacattataactgttacccagaaagaggaaggtggttgg
tgggagggaactctaggtgaaacaacagggtggtttccaagcaattatgttactgaatac
aaagatcctactggctcagtcactacatcaccaattagagcagtatctgaaatccaggca
ttcagaaatgtggtgcttaaagatattattgattctgagaaggctcatgttgcagaaatg
caaggccttgtcagtaactttctgttgccattagagaaaagtgatatgttgactatggat
gaattcaagcaacttactggaaacattaatgaagtattacaaattcatgaacaattccta
tctctccttgaagattgtgccactaaaacaggccctgaccagagggtgggaggtttgttc
cttcagtgggccccaaaaataaaatctgttcaccaaacttattgtgctggacacccaaag
gcagtatgcattttggataaatataaagaagagttaaatacatggatggaaagtgcaggt
gcggtttgtcctggggtgctcgtactaactgcaggactatcgaaacctttccgccgtctc
ggcaagtaccctgctatgttgcaagaactggcgaggcatgtacacgaagcccaccctgat
aggggcgatactcatcgcgcttctgtcgtgtataaggatattgctagcgcttgcacagct
ttacggcgtcagaaagagctggaattgcaagtggtaactggcgaggtccggggctggccc
ggcggagaactgtcagcattaggagacgtccttcacatgggcagtgtggctgtggggccc
tcccatcaggatcgatacctagttctgttcccttcgtcgctgctgttactgtcagtcagc
aaaagggtgtctgcttttgtttatgagggctgtcttcctttgacgggcataacagttgcc
aaactagatgatactgaaacacgaaaaaatgcattcgaaataagttccccaatgattgac
actatagtagcagtgtgtcaaaccaaagcggaggctgacaactgggttagcctgctccaa
aaacattctaacaccagtagccctgcccatgaacctggacagccacaatctttacctcat
atgaccatgagcgacagtaataactcggatctatcgtccggtctaagcagccacaaaaga
tcacactcatttaacaatcatcaaagctacacacagcacacgcaacaaactcagaaaaat
aagcaaaagaatcattccgcacgctggctcctgaattcctgcgacgcccttgaccaatcg
cccgccaagtccaataaaagtcccattgggaagaaattttcatctgttgatttcatcgat
acttctggatcaaactacagcaataaaggatggagcattacctgtctccggccagcgcct
cctctccgaccgcagtcattcacagtgggctcggacgagaacataggtccgacgcaccct
tacgccccgcaccaacggaagtccaactcttatgaagaagacgcccttatcttgaaggtc
atcgaggcgtattgtacttctgcacgttgccgaaacgctgtcagttccgtggactgcggc
cacttttctgtcggtaaagtacaatatcacgcacccgctactaacaaacttcactataac
tatactaaacttccgatcgtccagcgaagcgagacacccgagcagcaagggtgtagcagg
tcgtcgaaaataaaaagaaacaaaagctcatcggcggcggatgcatacctgtatcgcggc
ccggagacaaggcggctcttatccgaacgaaagtttcacttgaaccgttccaatcctaat
ctgtgggaatgttcggaggagcgcaagccgaaattgatctgtggtcgggagcggcgcagc
ggctcgcaccccagcctggctccgctgcgagtccagcccgcccccgcgcccgctccctct
cgttcagcccgctcatccacgtggtgctgtggcacattcgtcaaacagctcactaaatca
catcattttgattga
DBGET
integrated database retrieval system
