KEGG   Amyelois transitella (navel orangeworm): 106136107
Entry
106136107         CDS       T09957                                 
Name
(RefSeq) structural maintenance of chromosomes protein 6
  KO
K22804  structural maintenance of chromosomes protein 6
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atra03400]
    106136107
DNA repair and recombination proteins [BR:atra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     106136107
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_21 AAA_29 Sod_Fe_N Tup_N ABC_tran
Other DBs
NCBI-GeneID: 106136107
NCBI-ProteinID: XP_060805756
LinkDB
Position
3:join(1617119..1617338,1617452..1617610,1617972..1618213,1618377..1618627,1618742..1618939,1619345..1619538,1619718..1619864,1620561..1620688,1620806..1621001,1621598..1621763,1622078..1622297,1622932..1623102,1623434..1623621,1624362..1624530,1624790..1624900,1625478..1625678,1626323..1626456,1626807..1626828)
AA seq 1038 aa
MDEEEIIEEDKDGSIHSIHVRNFFCHDNLEINLNRNVNFIIGRNGSGKSAILTALVVGLG
GRASATNRGNNLHSFIKKGANSATVEIKIKNNSPRAYKHNEYGDYITIVRTINASGGGGY
KVKSASGEIVSTKFEEVNSIILAHDIQVDNPISVLNQDDARSFHASDAKKKYSLFRKATN
LDQTETNYMWALENCNKAHNIWNRKNEACQELEKEYKKWRLSYEQLQSRDEIEAKKQALQ
NEYYWSEIADYEREAEQVQAQYDKQKLKIEKLTEKLAKMADNFGNNKGLIETLKSQLDEK
NLEKAALEQELRDLEAEVRDTQTAHRSARAQVTKQGDLLARETRKVNDLEREIHNIDSGD
AASRRAELERRARAAAAAGEAARARYGTAQHGAAQARAAAARARALADDAELRARSQRGE
LQKLKRLLQDLESQSNDSLAVYGSKMVELCDRVRKAVARNQFSAPPKGPIGAYIKVKQKE
WGGALEHIIGGGITSFCVNSAEDSRKLFEIMGQVYGKDPKPAVTCSKFLARPHDVSRHEV
RAGGFGSALAALHAADPAVANYLIDSVGVERILLVHDEKDAMRLSNPIENVPRNCSKIVT
RDNKEYYPAPNYRSYGGSAKPCRYLMASTAERKLQLKAEIQEAEATLRSLEAKAEELESE
ARTARDDERAASQALQALVASRHDAEEAERAAAEALDQHQAPHHAVLVDELNITKEKLET
LSNQMETLKAKEQELRNKIDQSDVAVRDVKKRLASVTTAGRALVEEIEQEKLKIEQGATE
RQNLSRKLKEEESKLSQVDVILEGKRANIHKLTQEALKLCPRVENARDRAIVTQELKKTQ
LKLSSIRDDGLSKAEVGERLLDVEKRYRRATHTLNRLKRLIDEVKSTTEKHLKICQIVQT
HIIRRVKFCFQSMLSLRNYSGSMEIDITKGTLEIKCTGRDSGEKRHASTTSSLSGGERSY
STVAFIMALWECIELPFYFMDEFDVFMDNVNRKIVMELLIDHALKNTSRQFVFLTPQDAS
SVTAGPQISIHRMADPRP
NT seq 3117 nt   +upstreamnt  +downstreamnt
atggatgaagaagagatcatagaggaagataaagatggttcgattcacagtattcacgtc
cgcaatttcttctgccacgataacttagagatcaacttgaataggaatgtaaattttata
ataggacgcaacggtagtggtaaaagtgctatattgacggcgctagtcgttggattaggg
ggcagggcctccgccaccaacagaggaaacaacttgcattctttcattaaaaaaggtgct
aattcagcaacagttgagataaaaataaaaaataatagtcccagggcctataagcacaat
gagtatggagactacatcactatagtgagaactataaatgcctctggtggaggtggttac
aaagttaaatctgcttcaggagaaatagtatcaacaaagtttgaggaagtcaattcaata
atacttgcccatgacatacaagtagacaatccaatatcagtgctgaatcaggatgacgcc
aggagtttccatgcatctgatgccaagaagaagtactccttgttcagaaaggctacaaac
ttggaccaaaccgaaactaattatatgtgggcattagaaaactgtaacaaggctcacaat
atttggaacagaaaaaatgaggcctgtcaagaactagagaaggaatacaaaaaatggcga
ttgagttatgagcagttacaatcaagagatgagattgaagcaaagaagcaggcattacag
aatgagtattattggagcgagatagccgactacgaacgagaagcagagcaagtgcaggct
cagtatgacaagcagaagctcaagattgaaaagcttacagagaagctagctaaaatggct
gacaattttgggaacaataagggcttgattgagaccttgaagtcacaattggacgagaaa
aacctcgagaaggctgccttggaacaagagctccgtgacttggaagctgaagtacgggac
acacagacagctcaccgttctgcgcgggcgcaggtcaccaagcagggtgacctgctggcc
agggagaccagaaaagtcaatgatcttgagcgggagatacacaatattgactccggcgac
gcggcgtcgcggcgcgcggagctggagcggcgcgcgcgggcggcggcggcggcgggcgag
gcggcgcgcgcgcgctacggcacggcgcagcacggcgcggcgcaggcgcgcgccgccgcc
gcccgcgcgcgcgcgctcgccgacgacgccgagctgcgcgcgcgtagccagcgcggggaa
ctgcagaaactgaagcgtcttctccaagatttggagtcccagagcaatgattccctagcg
gtgtacggtagcaagatggtggaattatgtgaccgtgtacgaaaagctgttgccagaaat
cagttcagcgcaccaccgaaaggacctattggtgcatatataaaggtgaagcagaaagaa
tggggcggcgccctagagcacattatcggcggtggcatcacatcattctgcgtcaactcc
gcggaggattctaggaaactgttcgagatcatgggccaggtgtacggcaaggatccgaag
cccgcggtgacgtgcagcaagttcctggcccggccgcacgacgtgagccgccacgaggtg
cgcgcgggcggcttcggcagcgcgctggcggcgctgcacgcggccgaccccgccgtggcc
aactacctcatcgacagcgtgggcgtcgagcgcatactgctggtgcacgacgagaaggac
gcgatgcgtctatcgaacccaatcgagaacgtgccacgaaactgcagtaagattgtgacc
agagacaacaaggagtactacccggctccgaactaccgcagctatggcggctctgccaaa
ccttgtcgctacctcatggccagcactgccgagaggaaactgcaattaaaagccgaaatc
caagaagccgaggcaacactccgctcgctcgaagcgaaagcggaagaattggaaagcgaa
gcgagaaccgctcgagacgatgagcgagcggcgtcgcaagcgcttcaagcgcttgtggct
tcgcgacatgacgccgaggaggctgagcgggcagccgctgaagcgctggatcagcatcag
gcgccgcaccatgctgtgttggtcgacgaactcaacatcacgaaagagaagttggagact
ctgagcaatcagatggagaccttaaaagccaaggagcaagagctgaggaacaaaatagac
cagtcggacgtcgcggtgagagacgtgaagaaacgactcgccagcgtcactacggctgga
agagctctcgtggaagaaatagaacaagaaaagttgaagatcgagcaaggggccaccgag
cggcagaacttgagtcggaaactcaaagaagaagagagcaaactgtcgcaggtggacgtc
atactggaggggaagcgcgcgaacatccataagttgacgcaagaggctctcaaattgtgc
cctagagttgagaacgccagagaccgcgccatagtgacccaagagctgaagaagacccag
ttgaaactaagctccatccgagacgatggcctgtctaaagcggaggtgggcgagcggtta
ttagacgtggagaaacgttaccgccgcgccacgcacactctcaacaggctcaagcggctt
attgacgaggtaaaatcgacaacagagaagcacttgaaaatctgtcagatcgtgcagaca
catattataagaagagttaagttttgcttccagtccatgcttagtcttcgcaattattca
ggcagtatggagatagacataacaaaaggcaccttagaaataaaatgcaccggccgggat
tccggggagaagcggcacgcgagcacgacctcctctctgtcggggggagagcgctcgtac
tccacggtggccttcatcatggcgctgtgggagtgcatagagctgccgttctacttcatg
gacgagttcgatgtgtttatggataacgtgaaccgcaagatagtgatggagctgctcata
gaccacgcgttgaagaacacgagccgccagttcgtgttcctcacgccgcaggacgccagc
tcagtgactgccggcccccagatcagcatacaccggatggctgatccgcgaccatag

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