KEGG   Amyelois transitella (navel orangeworm): 106136245
Entry
106136245         CDS       T09957                                 
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106136245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106136245
   03016 Transfer RNA biogenesis [BR:atra03016]
    106136245
Enzymes [BR:atra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     106136245
Messenger RNA biogenesis [BR:atra03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     106136245
Transfer RNA biogenesis [BR:atra03016]
 Prokaryotic type
  tRNA degradation factors
   106136245
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1
Other DBs
NCBI-GeneID: 106136245
NCBI-ProteinID: XP_060805038
LinkDB
Position
18:complement(join(1768467..1768619,1769638..1769871,1770360..1770483,1771507..1771694,1773965..1774119,1774994..1775184,1775844..1775971,1777160..1777373,1778126..1778282,1780656..1780822,1781527..1781737,1782311..1782516,1782680..1782792))
AA seq 746 aa
MLSRKRLILSKIKARARLYCRYFSSESVGHADVSFSNGTSLKLSTGQYARFADGACVATL
GNTSVLSTVVSKAKASNSSFLPLVVDYRQKAAAAGRIPTNFLRRELGPTEREILTSRLID
RSLRPLFPQNYFYDTQIVCNMLAVDATNPPETIAINAASAALALSDVPWNGPVGAVRIGQ
IDNEMIINPTRRDLEKSNLNLVISATKSNLVVMLEGSANDILQQDLLKAIKLGTKEAQHI
VRGIEQLQKLHGKRKRVIEEATPVSSDVIDSIKTLSTMKIREILSDHSHDKMSRDHAISE
LRQTVLNQLRDTDIDVGTLQDTFNSHLKHTFREMIFETDVRCDGRHLDQLRDISCQVSLY
EPLHGSALFQRGQTQVLCTVAFDSPDSALKMDTLTMLTSGIKEKNFFLHYEFPSYATGEV
GRSGAPGRREAGHGALAERGLRPVLARQPYAVRLTAEVLESNGSSSMASVCGGSLALLDA
GVELASPAAGVAVGLVTRTSEGLLTDYRILTDLLGIEDYMGDMDFKVAGTKKGITALQAD
VKLPGIPLKIVMEAVQKACDAKSKIIDIMNQCIDKPRKGRKENMPVIEEMEVELHKRPKL
LGLGGINLKKLYVETGVQVTPIDETKYSVFAPSQTAMEEAKARIATWLTSERTPELEFGA
IYKAKVVEVKDIGVLVTLYPGMAPALVHNSQLDHRKIMHPSALNLEVGSEIQVKYFGRDP
VSGQVRLSRKVLTSPPPALVRKLDKS
NT seq 2241 nt   +upstreamnt  +downstreamnt
atgcttagtagaaaacgattaattttatcaaaaattaaagcccgtgcccgtttatactgt
cgttacttctcatcagaatctgtaggtcatgcggacgtatcattttcaaatggaacatct
ctcaaattatcaaccggccaatatgcacgctttgctgacggcgcgtgtgtagctaccctt
ggaaacaccagcgtcttatccactgtagtctccaaagccaaagcaagcaacagttccttt
ctgccgcttgtggtggactacagacagaaagcggcggctgctggacgtattcctactaac
ttcctaagaagagaattaggtcccacagaacgagagatcctaacatcccgtctcatagac
cgctctctccggccgcttttccctcagaactacttttacgatacgcagatagtttgcaac
atgttagcagtagatgctaccaaccctccggagacaatagctatcaatgcagccagtgcg
gctcttgctttatcagacgtgccttggaacggccctgttggggctgttagaataggccaa
attgacaacgaaatgattataaaccctacccggcgtgaccttgagaagtctaacctcaac
ctcgtgatatcggcaacgaagagcaacctggtagtcatgttggaaggcagtgccaatgac
atactgcagcaggacctactgaaggccatcaaattagggacgaaggaagcccaacacata
gtaagaggtatagaacagctgcagaaactgcacggcaaacggaaacgggtgattgaggag
gcgacgccggtgagcagtgacgtcatagactccataaagacactgtccaccatgaagatt
agggagatactcagcgaccacagtcacgacaaaatgtcgcgcgatcatgcgatttcagag
cttcgtcaaacggttctcaaccaactgcgggacactgatatagacgtgggaacgctacaa
gacaccttcaactctcacctcaagcacacgttcagggagatgatcttcgagacagacgtc
cgctgtgacggcaggcacctggaccagctcagggacatcagctgtcaggtgtctctctac
gaaccgctacacggcagcgccttgttccagcgcgggcagactcaggtgctgtgcacggtc
gcgttcgattccccggacagcgctctcaagatggacacgctcacgatgcttaccagcggc
ataaaagaaaagaacttcttcctccactacgagttcccgtcgtacgcgaccggcgaggtg
ggccgcagcggagccccggggcgccgcgaggcgggccacggcgcgctggcggagcgcggg
ctgcggcccgtgctggcgcgccagccctacgccgtgcggctcacggccgaggtgctggag
tccaacggttcaagttccatggcgtcagtctgcggcgggtcgttagcgctgctggacgcg
ggagtcgaactggcgtcccccgccgccggcgtcgccgtggggctcgtcacccgcacctca
gagggactcctcacagactaccgcatcctcactgacttgttgggtatagaagactacatg
ggcgatatggacttcaaggtggctggtacaaagaagggcatcacagctttgcaagccgac
gtgaaactgccgggtataccgctcaagatagtgatggaggctgtgcagaaagcgtgcgat
gccaagagcaaaattatcgatattatgaaccagtgtatcgataagcctaggaaaggtcgc
aaagagaacatgccagttatagaagaaatggaggtggagctacacaagaggccgaaactg
ctcggcttaggaggaataaatttgaagaagttatacgttgagactggagttcaggtgaca
ccaatagacgaaactaaatatagtgtgttcgcgccatcacaaactgccatggaggaggcc
aaagcgcgcatagcgacatggttgacgtcggagcgaactccagaattagagttcggcgcc
atttataaagctaaagtcgttgaagtgaaagatataggagttttggtgactttatatccg
ggaatggcgcccgctttggttcataactcgcagttggatcatagaaagataatgcatcct
tcggctttgaacctggaagtaggatcggagatacaagtgaaatacttcgggcgggacccc
gtctcggggcaggtgagactctcccgcaaggtcctgacatccccgccgccggcgctcgtg
aggaaactcgacaagagctag

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