KEGG   Amyelois transitella (navel orangeworm): 106136249
Entry
106136249         CDS       T09957                                 
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03013  Nucleocytoplasmic transport
atra04141  Protein processing in endoplasmic reticulum
atra04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106136249
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106136249
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    106136249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106136249
   04131 Membrane trafficking [BR:atra04131]
    106136249
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106136249
Membrane trafficking [BR:atra04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    106136249
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    106136249
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    106136249
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 ANAPC4_WD40 EIF3I WD40_Gbeta WDR55 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 106136249
NCBI-ProteinID: XP_013192191
LinkDB
Position
18:complement(join(3081081..3081452,3081954..3082523))
AA seq 313 aa
MITVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPV
WQVAWAHPKFGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPADYGLILA
CCSSDGSISIISYAQDSGNWDVKKIPGAHAIGVNSVSWCPAISADLNLDPLSNKEAPKRI
VSGGCDNLIKIWREQGDQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVVIW
TSDDNVSWTPTILNVFDDVVWSVSWSLTGNILAVSGGDNKVSLWKESSDGQWICISEVAK
GLGQTPNDERSTL
NT seq 942 nt   +upstreamnt  +downstreamnt
atgattactgttctaaatacaatcgatacaggccacgaagatatgatacatgatgcagaa
ctggattattacggattgagattagccacatgctcttcagacaactctgtcaagatttac
gacatcaagaatggaacacaaactcttgcagctgacttgaagggtcatttcggcccggtg
tggcaagtagcttgggcacatcctaaattcggcaatttgctggcatcatgctcttacgac
agaaaagttattatttggaaagaatctggagaatggacaaaattgtatgaatacaccgga
catgaaagttctgtaaattcagttgcgtgggcgccagctgattacggcctgatattggca
tgttgtagttccgatggctcaatatctattatatcatatgcacaagatagtggtaactgg
gatgtaaagaagatccccggagcgcatgctatcggcgtcaactctgtgagttggtgtccc
gctatctctgcagacttgaacctggacccactgagcaataaggaggcaccaaagagaatt
gtttctggtggatgtgacaatctcataaagatatggcgtgaacaaggagaccagtgggtt
gaagaaaacaggctagaaatgcacatggattgggtcagagacgtcgcctgggctccttca
cttgggcttcagagatcaatgattgctagctgttcccaggacaagagagtggtcatctgg
accagcgatgataatgtatcttggacacctaccatcctcaatgtgtttgatgatgttgta
tggagtgtgagctggtctttaacggggaatatccttgcggtgtctggtggagacaacaag
gtcagcttatggaaggaaagcagtgatggccagtggatatgcatcagtgaagttgccaaa
gggctagggcaaacacctaatgatgagaggagtacactctga

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