Amyelois transitella (navel orangeworm): 106136343
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Entry
106136343 CDS
T09957
Name
(RefSeq) zinc finger CCCH domain-containing protein 14
KO
K23038
zinc finger CCCH domain-containing protein 14
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106136343
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
106136343
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_2
PWI
DUF2844
Shadoo
Motif
Other DBs
NCBI-GeneID:
106136343
NCBI-ProteinID:
XP_013192322
LinkDB
All DBs
Position
15:complement(join(5308825..5309033,5309243..5309428,5309890..5310476,5311096..5311233,5311695..5311873,5312314..5312452,5313559..5313696,5314155..5314390,5314564..5315222,5315338..5315505,5316223..5316265,5316838..5316876))
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AA seq
906 aa
AA seq
DB search
MDDVGSEIGQKMRSAIKAKLTELGCYVDDELPDYVMVMVANKRTRAQMEDDLQLFLGDNT
ELFVNWLHQVLKKLQEVTVTAPLKTVEKEKSKERSISKERKSKEKKDKSKKGETVKKSKK
KDKEKSHKKKEDKKIHKSKKKSKQHEMIRPNIPPLLMNMEKESEPSITDVFAGQILKNHG
ISLDVLKDEIKIVDKKPILKEIKRPILPIIDPATISSQIEPASSQFSEVEVAQGEPTRKT
SVSSTGAPREEQIKEINEIEAKIQGLKQKLTEQLDSMSDDEDFLNIRTEAEELMNDFAED
VFQEISSNAPVATPPLVTQKSKSPSPPKIIEVSKPKPLDPIETLPQIELKLPKRPIRERL
GARDDKKTAEKKETKRIESPERLTPEREPEFRPQKSAKSRLSDPPEKRASISDDNTSDKS
ESKRITSKVSVLESRARRAACASVVRVRPRPRVGAPASSLLLRAVADAHKSLLNIPPKVE
SEPPKVKRALVLPMRRCVDAQKIVIQVPGADIQTDNNSDNISLEVDSEDDKSSKVTSETD
KEEYVPSPITKKFINNEYVPSRRPERTSCRKDDTLIIETLNIHNPTVDKDKNTQFIVTMD
GFDPNAFLAKKLLTEGLINDEEELKELKNKSKESSFVKTKEKDKPKENTQETDKNNEKSS
PNQKKRASDVSDDSGTQVIINTQEKETRKCDIKEEKDRVVEKRKINIKVEKDDSPVKRRK
ASPIVFDVGKKEKEKEAEKEERVERTRERTESASSDNHVVVTTTGSSHKYDSLPPLSTAV
PQGDRKPAWCRSFPLCRYGPQCAFQHPRCKFAAACTRRGCAYSHNLNAPTSPTTPVLASH
VVPAANYKTISPAALPSVCKFYPNCVNPACHFYHPKPCRYGKACLNKLECNFYHSDLPIS
KYRYPV
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtcggcagtgaaattggtcagaaaatgcggtcggccattaaggccaagctg
acagaattgggctgttacgttgatgatgagctccctgactatgttatggtgatggtggcc
aacaagaggactcgggctcagatggaggatgacctccagctgttcctcggagacaacact
gagctgttcgtcaattggctccatcaggtgttgaagaaactacaagaagtcaccgttact
gctccactcaaaaccgttgagaaagagaaaagcaaagagcgatcaatatccaaagaacgc
aagtctaaagaaaaaaaggataagagcaaaaaaggtgaaactgttaagaaatctaaaaag
aaggataaggagaaaagtcacaaaaagaaagaagacaaaaagatacacaaaagcaagaaa
aagagtaaacaacatgaaatgattcgacctaatatccctccactattgatgaatatggag
aaagaatctgaaccttcaattactgatgtttttgctggtcaaattctcaaaaatcatgga
ataagtttagatgttctgaaagatgaaataaaaattgttgataaaaagcctatcttaaaa
gaaattaagaggccaatactacctataatagatccagcaactatatcatcgcagattgag
cctgcatcctcacagttttcagaagtggaggttgctcagggtgagcctacacgcaaaaca
agtgtatcatcgacaggagcgccacgagaagaacaaattaaggaaattaatgaaatagaa
gctaaaatccaagggctaaagcagaaattaacagaacaattagattcaatgtcggacgat
gaagatttcttgaatattaggacagaagctgaggagttaatgaacgattttgctgaggat
gtttttcaggaaatatcatcgaatgcgccagtcgctactcccccactagtcacccaaaaa
tccaagtccccttctccacccaaaatcatagaagtctctaaacctaaacccctagatccc
atagaaacattaccacaaatagagctgaaattacccaagagacctattcgagaacgcctg
ggtgccagagatgacaagaagactgcggagaaaaaggaaactaaacggatagaaagtcct
gaaaggcttacaccagaaagagaaccagagtttcggccacagaaatcggctaagagtcgc
ctcagtgatcctccggagaaaagggcttccatatcagatgataacacttcagacaagtcg
gaatccaaaaggattacttcaaaggtgtcagtgctggagagccgggcgcgccgcgcggcg
tgcgcgagcgtggtgcgcgtgcggccgcggccgcgcgtgggcgcgcccgcctccagcctg
ctgctgcgcgcggtcgcggacgcgcacaagagtctgctcaatattccaccaaaagtagaa
tctgagcctccgaaggtgaagcgagcactagttctgccaatgcggcgatgtgtggacgcg
caaaagatcgtgatacaggtgccaggggcggacatacagacagacaacaatagcgacaac
atcagcttggaagtggacagcgaagacgacaagagctcgaaagtgacaagcgagactgat
aaagaagaatacgtcccgtctccaataacgaagaagttcatcaataacgagtacgtccca
tcccggcggccggagaggacgtcttgtcggaaagatgacacgctcatcatagagacactg
aacattcacaacccaacagtcgataaggacaagaacacgcagttcatcgtcactatggac
ggctttgatcccaacgctttcctagccaagaaacttttaacagaaggtctcataaacgac
gaggaagaattgaaagaattaaaaaataaatcgaaggaatcttcttttgtaaaaactaaa
gaaaaagataaacctaaagaaaatactcaagagactgacaaaaacaatgagaaatctagt
ccaaaccagaagaagcgagccagtgacgtaagtgatgacagtggaactcaagtgattatt
aacacacaagagaaagaaacgcggaaatgtgatataaaagaggaaaaagatagagttgta
gagaaaaggaaaattaatattaaagtggaaaaggatgatagtccggtcaagaggcggaaa
gcgtcgccaatagtgtttgatgtgggcaagaaagagaaagaaaaggaggcggagaaagaa
gaaagagtagagagaacaagagagcggactgagagtgcaagcagtgacaaccatgtggta
gtgaccacgactggcagctcacataaatatgattcgttgccgccattatcgacggcggtg
cctcaaggggatcgcaagccggcgtggtgccgctcgttcccgctgtgccgctacgggccg
cagtgcgcgttccagcacccgcgctgcaagttcgcggccgcctgcacgcggcggggctgc
gcgtactcgcacaatctcaacgcgcccacctcgcccaccacaccggtattagcctctcac
gtggtcccagcagcgaactacaaaaccatatctccggcagccctgcccagtgtttgcaag
ttctacccgaactgcgtcaacccggcatgtcacttctaccaccctaaaccgtgccgctat
ggaaaagcttgccttaacaaattagaatgtaatttctatcacagcgatctcccgatatca
aaatatcgctatcctgtataa
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