Amyelois transitella (navel orangeworm): 106136386
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Entry
106136386 CDS
T09957
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atra04121
]
106136386
03400 DNA repair and recombination proteins [BR:
atra03400
]
106136386
Enzymes [BR:
atra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106136386
Ubiquitin system [BR:
atra04121
]
Ubiquitin ligases (E3)
Atypical E3
106136386
DNA repair and recombination proteins [BR:
atra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
106136386
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
C1_1
C1_2
Motif
Other DBs
NCBI-GeneID:
106136386
NCBI-ProteinID:
XP_013192372
LinkDB
All DBs
Position
10:join(6795979..6796078,6796165..6796354,6796621..6796729,6797186..6797344,6797733..6797869,6801244..6801418)
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AA seq
289 aa
AA seq
DB search
MSYGNVHRFVLRSIASRGVMSLPEIEEAIRSYSDDQVSSLEDMIQEINDKIRPFKQTIKL
TNDELTNEEVVIFLSLGYDEATKAQSFFTATELEYFRVLMEQIMTTEARQITGIHALNLV
GSMKSTFTKTDAQKLLDTWCRMRYLEKDENNYALGVRTIHEFEGYLRQNMPDTIEECCLC
KQIVFRGYNCPSCGLAIHTRCLKRYLTKVDKWPCCKCDFNAEQLERLQSAEHSRLTQLPN
ETRRSDEDVPKEASQASTVVDSEASIPEETQEIIPEISQRVTRKRARPN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggtaacgtgcacaggttcgttctaaggtcaatagcaagtcgcggcgttatg
tccctaccggagattgaagaagcaataagatcatattcagatgatcaagtttcatctctt
gaagatatgattcaggagataaatgacaaaatacggccttttaaacaaactattaaattg
accaatgatgagttaaccaatgaagaggtggtgatatttttatcactaggatatgacgaa
gcaaccaaagcacagtcattctttactgctacagaattagagtatttcagggttctcatg
gagcaaataatgactacagaggcaaggcaaattacaggtatacatgccttgaacttagtg
ggaagcatgaaaagcacatttactaaaacagatgcacagaaacttttagatacatggtgc
agaatgcggtatttagagaaggacgaaaataattacgctttaggagtgcgcactatacat
gaatttgaaggatacctccgacagaatatgccagacactattgaagagtgctgtctttgt
aaacaaattgttttcagaggttacaactgtccttcttgtggtttagccattcatactcgc
tgcctaaagcggtacttgacgaaggtggacaagtggccgtgctgcaaatgcgatttcaat
gctgaacagctggagaggcttcaaagcgctgaacattccaggttaacacaactcccaaac
gagacgcggcggtctgacgaagacgttcctaaggaggcttcccaagcatctaccgttgtg
gacagcgaagcgagcatcccggaggagacacaggagattattccggagatttcacagagg
gttaccaggaagagagcgaggccgaattag
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