KEGG T09957: 106136396

Amyelois transitella (navel orangeworm): 106136396

Entry

106136396         CDS       T09957

Name

(RefSeq) uncharacterized protein LOC106136396 isoform X1

K13179

ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]

Organism

atra Amyelois transitella (navel orangeworm)

Brite

KEGG Orthology (KO) [BR:atra00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atra03041]
    106136396
   03009 Ribosome biogenesis [BR:atra03009]
    106136396
Enzymes [BR:atra01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     106136396
Spliceosome [BR:atra03041]
Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    106136396
Ribosome biogenesis [BR:atra03009]
Eukaryotic type
  90S particles
   Helicases
    106136396
  Pre-60S particles
    106136396

SSDB

Motif

Pfam:

DEAD Helicase_C CTE_SPB4

Other DBs

NCBI-GeneID:

106136396

NCBI-ProteinID:

XP_013192382

LinkDB

Position

10:complement(join(6486998..6487291,6487619..6487789,6488247..6488399,6493518..6493677,6494075..6494213,6494630..6494794,6494881..6495030,6496290..6496550,6496739..6496876,6497335..6497406,6497553..6497624,6497955..6498026,6498145..6498241))

AA seq 647 aa
MVMPEKVLMRKIKKREKRKLQLMSKKYNANNAESEPQNAKNRPHEINEDCAKTDYKNSEP
QEAKKRPHEINEDSAKTDTKNLEPQEAKKRPHEINEDSAKTDTKKKHKKQKADVKKEPEV
KDENENGDSQNVEEADSDNKIEIKPNDESQLPGSSLSLSISQENKFSSLEGKVCERTLRA
IKDMGFTTMTEIQAKALPPLLKWRNLVGIAKTGSGKTLAFLIPAIELVYQLELKRRNGTG
VIILTPTRELAMQTYGVLMELMKYHRHTYGMVMGGANREKEAWKLLHGVNILVATPGRLL
DHMQNTPGFVHKHAYGLIIDEADRMLEIGYEEEIKQIIKLLPKERQNILFSATLTKKTVA
LIKAIGNCSFMHVGVEDQKQATVETLEQGFLLCPSEMRMLVLFTFLKRNTTKKVMVFLST
CLSVIYHYKLFNYIDLPVMYIHGKQEQAERTTTFFQFCNAESGILLCTDVAARGLDIPAV
DWIIQYDPPDDPKEYIHRVGRTARGLGTNGHALMFLRREELGFLWYLKQWKVTLNQYEYS
QDKVADIQLPLEKLLSRNYYLKQCAKDAYRSYLRAYDSHKLKNIFDINKIDLAKVAKSFG
FAFPPAVKLNITKTARLQAVKAKASQSNKEQKTKIYRQKGGHKRFNN

NT seq 1944 nt +upstreamnt +downstreamnt
atggttatgccagaaaaggttttaatgcgtaaaattaaaaaaagagaaaaaaggaaactg
caacttatgagcaaaaaatataatgcaaataatgcagaatctgaaccacagaacgccaag
aaccgaccacatgaaatcaatgaagactgtgcaaaaacagattataaaaattcggaacca
caggaagccaagaaacgaccacatgaaatcaatgaagacagtgcaaaaacagatactaaa
aatttggaaccacaggaagccaagaaacgaccacatgaaatcaatgaagacagtgcaaaa
acagatactaaaaaaaaacataaaaagcaaaaggctgacgtcaaaaaagaacctgaggta
aaagatgaaaatgaaaatggtgattcacaaaatgttgaagaagcagactcggacaataaa
atagaaataaagccaaatgatgaaagccaattgcctgggtccagtttaagtctcagcatt
tcacaagaaaataaattctcctctttggaaggcaaagtgtgtgagcgtactctcagggcc
attaaagacatgggcttcaccaccatgacagaaatccaagccaaagcgttaccaccattg
ctgaagtggcgaaatctcgtgggaatagctaaaactggctccgggaagaccctggcattt
ttaattcctgcaattgaattggtttatcagctggagttaaagcgtagaaatggaactggt
gttattattcttacgccgacaagggaattggcaatgcagacatatggagttttgatggaa
ctgatgaagtatcatcgtcacacttatgggatggtgatgggtggagcgaacagagaaaaa
gaagcttggaagttacttcacggagtcaacattttagtagcaacaccgggtcgattgctt
gatcacatgcaaaacacaccaggcttcgtgcacaaacatgcttacggcctcatcatcgat
gaggcagacagaatgctagagattggttatgaagaggaaatcaagcagatcatcaaacta
ctgcccaaagaacgacaaaacattctattcagcgccactctgactaagaagactgtagca
cttattaaagccattggaaattgctcatttatgcatgtaggcgttgaggaccaaaaacaa
gcaaccgtggaaactttggaacaagggttccttttgtgcccttcagagatgcgtatgctg
gtcttatttacattcctaaagaggaacacaacgaagaaagttatggttttcctctcaact
tgtttgtccgtgatataccattacaaattgttcaactacatcgacctgcctgtcatgtat
atacatggcaaacaagagcaagcagagcgcactacaactttcttccagttctgcaatgca
gagtccggtatacttttatgtacggacgtagcggctagaggcctagacattccagctgta
gattggattatacaatatgacccacctgatgatcctaaggaatacattcaccgtgtgggc
agaacagcgaggggtctcggtaccaacgggcacgcgttgatgttcctgcggcgcgaggaa
ttgggattcctttggtatctgaagcagtggaaggtcaccctaaatcaatatgaatactct
caggacaaggtggctgatattcagttgccgttggaaaagttattatcaagaaactattac
ctgaaacaatgtgccaaggatgcatacaggagctatctcagggcttacgattctcacaaa
ttgaagaatatatttgacatcaataagattgatttggctaaagtagcaaaatcatttggt
tttgctttccctcccgctgtaaaattaaacataacaaagacggcccgcctccaagcagtt
aaagccaaagcaagccagagcaataaggagcagaaaactaagatatacagacaaaaaggt
ggtcataaacgctttaataattaa

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