Amyelois transitella (navel orangeworm): 106136518
Help
Entry
106136518 CDS
T09957
Name
(RefSeq) paired box protein Pax-5
KO
K15608
paired box protein 2
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106136518
04131 Membrane trafficking [BR:
atra04131
]
106136518
03036 Chromosome and associated proteins [BR:
atra03036
]
106136518
Transcription factors [BR:
atra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
106136518
Membrane trafficking [BR:
atra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
106136518
Chromosome and associated proteins [BR:
atra03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
106136518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
106136518
NCBI-ProteinID:
XP_013192543
LinkDB
All DBs
Position
25:complement(join(6293319,6296690..6296798,6298568..6298702,6301999..6302149,6303795..6303880,6306176..6306350,6306869..6306974,6314456..6314653,6325836..6326001,6352693..6352749,6355646..6355805))
Genome browser
AA seq
447 aa
AA seq
DB search
MDLHAPPLVVHGYEPHAPLLEVEGLDPHSPQQKVLIHAPTLQGQELISDHRNGEYDFADE
QYHAHSSNQSSDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHSGVRPCDISRQLRVSHG
CVSKILSRYYETGSFKAGVIGGSKPKVATPPVVDAIAAYKRENPTMFAWEIRDRLLSEGI
CSQDNVPSVSSINRIVRNKAAEKAKHAHNQQQQQQQEQEISSAQGSVVSVITHAGNAPGT
TAVLSPTTEQHVTNTGSYSINGILGIEQVDGLHNGTTGLKRKRHEDQDENRDFNSHSEDD
VKRQRSHYNGDQIYSNLWSSSKWSLKDEYKLLSELGGAAGGATGYYENLFDAPYEHAAHP
HYTPHSATNDSTGSNGGAGGEPPSAAASPDAAALVVLQPPAPPYPPYAHYDGTTTLASEY
AYAAPYSQYSPYGGPYTHSAATGLLTK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcacgctccacctttggtcgtccatggatatgaacctcacgccccattgcta
gaagtcgaaggtttggacccgcatagcccccagcagaaagttctcattcacgcgccaacg
ttgcagggtcaagagctgataagcgatcatcggaacggagagtacgactttgcagatgag
cagtaccacgcgcacagcagcaaccagagcagcgacggtcacggcggcgtaaaccaactc
ggcggtgtgttcgtcaacggaagaccgttgcctgacgtcgtcagacaaaggatagtggag
ctggcccacagcggggtcaggccttgcgacatcagcaggcagctcagggtgtcccacggc
tgcgtctccaagatactgtctaggtattacgaaacgggcagcttcaaagccggcgtcata
gggggctccaagccgaaggtggcgacgccgcccgtggtggacgccatcgcggcatacaag
cgcgagaacccgactatgttcgcgtgggaaataagggacaggctgctgagcgagggcatc
tgcagccaggacaatgtgccttctgtttctagtataaataggattgtacgcaacaaagca
gctgagaaagcgaagcatgcgcataaccagcaacagcagcagcaacaggaacaggagatc
agctcggcgcagggcagcgtcgtctctgtcataacccatgcaggcaacgctccgggcaca
acagctgtgttatcccccactacagaacagcatgtaaccaacacaggcagctacagcatc
aacggcatcctgggaatcgaacaggtggacggtctgcataatggcaccacgggtttgaag
aggaaacggcatgaggaccaagacgaaaatcgggatttcaatagtcattcagaagatgac
gtgaagagacaaaggagtcactataatggagaccagatatactctaacctttggtcatcg
tcgaaatggagtctcaaggacgaatacaaactgctctccgagttgggcggggcggcgggc
ggcgcgaccggctactatgaaaacttgtttgacgctccgtacgaacacgccgcccatccg
cactacacgcctcattctgccaccaatgattcaactggttctaacggtggtgctggtgga
gaaccaccttcggccgccgccagtcctgacgcggcagccctggtggtacttcaaccacca
gcgccgccgtatccgccgtatgcgcattatgatggcacgacaacactagccagtgaatac
gcgtacgcagctccctactcccagtactcgccgtacggagggccgtacacgcactccgcc
gctacggggctgctgaccaagtga
DBGET
integrated database retrieval system
