KEGG   Amyelois transitella (navel orangeworm): 106136526
Entry
106136526         CDS       T09957                                 
Name
(RefSeq) protein transport protein Sec24C
  KO
K14007  protein transport protein SEC24
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106136526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atra04131]
    106136526
Membrane trafficking [BR:atra04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    106136526
SSDB
Motif
Pfam: Sec23_helical Sec23_trunk Sec23_BS zf-Sec23_Sec24 Gelsolin VWA
Other DBs
NCBI-GeneID: 106136526
NCBI-ProteinID: XP_060807448
LinkDB
Position
25:complement(join(6750422..6750559,6753380..6753573,6754186..6754356,6755145..6756554,6758083..6758295,6758873..6759041,6760032..6760192,6760583..6760730,6762869..6763054,6763827..6763916,6764596..6764709,6765234..6765343,6766773..6766962,6770298..6770383,6770881..6770998,6771555..6771718,6772575..6773907))
AA seq 1664 aa
MMNPMYLPPGQNNNAPNNPMGYPPAQDHNGVPNANIYGQTPTNGPPSKPFDQNDMSQKMQ
GMNLNGPQGFGPPSSQLPPGQLPPGQFPPGNNFSQPGFGPGQAPPGQRPVGSFPPGRPPV
GGAPSQMQPPMGQKPQVPPPSSTPGPVPTSFPQGFQGPPSSQSNFPQGQSMQQPMSSQPS
QLSGAPMGQQPFGPPGSRPGPGQIPPQQPGQMPPQQPGQMPPQQPGQMPPQQPGLPPQAS
RQTGLPPPGHKPGMPQPQPGFQQPGQPGLPQPGLPQSQGLSQQHGPPQSQGGLPPQSNLN
RPGLPPQPQGLPPSSQAQPGLSQPGLPPQPGIPPQQNQQGLQQPGMPPQLSQPGLPPQPG
LPPQGLSQPGLPSQPGFSQPGLPPQPGMSQPQQYQNQGFSQPGVPPQPQYQMPGLPHMPP
PASQQRQYPGMPANQPGYGQQPGYGMPPAPVQQQPQSFQPPTSGYPPHQPPFPGQQPSYP
GQQYQQPQKQLDPDHMPSPIQVMADDQANRGGVFVTNEKGQVPPLVTTDFVVDDKGNASP
RYIRSSMYSVPVTADLLKQTSIPFCVVISPMAETVGAELEPPLLDFAALTNSPSMGPVRC
GRCKAYMCPNMKFIDAGRHFKCAFCKATTEVPMEYTQYVNGTQQYGRVPAEMALGAYEIV
ATKEYCRNNTLPNPPAVVFVIDVSYNSIKSGLLDCVCENILSIIEAMPKDEQTGKSWTRV
GFITYSSTVHFYNIKGTLAQPQMLSVGDVSDMFVPLLEGFLSLPEDSGAVLSSLLAQLPA
MFQGNKETETVLLPAVQAGLEALKAADTSGQLLVFHTTLPTYNAPGKLINREERKLLGTD
KEKQILAPQTTAYNELGQSCSAAGVSVELFVCNNSYIDAATIGQLPRLTGGQLHKYTYFT
VDIDGPRLLSDVSRVLARPTAHDAVMRVRSSTGVRATDFFGHFFMSNTTDVELAAIDSDK
AIGIEIKHDDKLTNEDGVYLQAALLYTHRSGQRRLRVLNLALNVAHQLADVYRSVELDTC
INFLTKQAVWALRDSAPRAVREGLSTRCARSLACYRRHCASPSSAGQLVLPESMKLLPLY
TNCLLRSDAIAGGDSLSLSHYTHCASPSSAGQLVLPESMKLLPLYTNCLLRSDAIAGGDS
LSLSHYTHCASPSSAGQLVLPESMKLLPLYTNCLLRSDAIAGGDSLSLSHYTHCASPSSA
GQLVLPESMKLLPLYTNCLLRSDAIAGGDSLSLSHYTHCASPSSAGQLVLPESMKLLPLY
TNCLLRSDAIAGGDSLSLSHYTHCASPSSAGQLVLPESMKLLPLYTNCLLRSDAIAGGDS
LSLSHYTHCASPSSAGQLVLPESMKLLPLYTNCLLRSDAIAGGDSLSLSHYTHCASPSSA
GQLVLPESMKLLPLYTNCLLRSDAIAGGDSLSLSHYTHCASPSSAGQLVLPESMKLLPLY
TNCLLRSDAIAGGDSLSLSHYTHCASPSSAGQLVLPESMKLLPLYTNCLLRSDAIAGGPD
LTCDDRSCAMYRALTADVSTSVVYTYPRLLPLHAGNTPLRASVDKMSDRGVYLLENGVHM
LVWVGSQAPPEFVRDVFGAASAQQIDAQVCELPALDNAASARVRALVDDARVRRRAAMRL
TIMRQHDKLETVLRHFLVEDRGVDGSASYVDFLCHIHKEVRALL
NT seq 4995 nt   +upstreamnt  +downstreamnt
atgatgaatccaatgtacctgcctccggggcaaaacaataatgcaccaaataaccccatg
ggttaccccccagcccaagatcacaatggtgtacctaatgccaacatatacggccaaaca
cccacaaatggtccaccatctaaaccctttgatcaaaacgatatgtcccaaaaaatgcaa
ggcatgaacttgaatggacctcaaggatttgggcccccatcttctcaattacctccaggg
caattgcctcctgggcagttccctcctgggaacaacttttcccaaccaggattcggccct
ggtcaagccccgcctggacaaagacctgtcgggtcgtttcctcctggtcgtcccccagtt
ggtggagcgccatcgcaaatgcaaccgccgatgggtcaaaaacctcaagtgccacctccg
tcgtcaacccctggtcctgtgcccacgtctttccctcaagggtttcagggcccaccctca
agtcagtcgaatttccctcaaggtcaatccatgcagcagccgatgagctcgcaacctagt
caactttctggagcgccaatgggacaacaaccttttggtccacctggttctagacccggt
ccaggtcaaatacctccacagcaaccaggtcaaatgcctccacagcaaccaggtcaaatg
cctccacagcaaccaggtcaaatgcctccgcagcaaccagggcttccaccgcaggcttcc
cgccagacgggattaccgccgccagggcataaaccgggaatgccgcaacctcaaccaggt
tttcaacagcctggacaaccaggtcttccgcaaccaggtttacctcagtcacagggctta
tcacagcaacatgggcctccgcaatcccaaggaggattacctcctcaatctaatctcaat
agacctggattaccccctcagcctcaaggcttacctccatcatctcaagcacagccaggc
ttaagccaacctggtttgcctccccaaccaggtataccacctcagcaaaaccagcagggg
ttgcagcaaccaggaatgccacctcaattgtctcaaccaggtttacctccccaacctggg
ttgccaccccaaggtttatctcaaccaggcttaccatctcaaccagggttttctcaacca
ggcttacctccacaaccaggcatgtctcaacctcagcagtatcaaaaccaagggttcagt
caacctggagtacccccacagccacagtatcagatgccggggttaccacatatgccgccc
ccagcttcgcagcagaggcagtatccagggatgcccgctaaccagccaggatatggacag
cagcctggttatggaatgccaccggcgcccgtccagcagcaaccgcagagcttccagccc
cccacttcagggtacccgccccaccagcctccgttccctggtcagcaacccagctaccct
ggacagcagtatcagcagccgcagaagcaactggatccggatcacatgccaagcccgatt
caagtgatggccgatgaccaggccaatagggggggcgtgttcgtcaccaacgagaagggt
caggtgccaccgctggtgaccacagatttcgtcgtcgatgacaaagggaacgcgagtccc
cgttacatcaggagctcaatgtacagtgtcccggtgaccgctgacctcctgaagcagaca
tccattccgttctgtgttgttatatcaccgatggcggaaaccgtaggcgctgagctggag
cccccactcctggacttcgcggccctgaccaactcccccagcatgggccccgtgcgctgc
ggccgctgcaaggcgtacatgtgtccaaacatgaagttcatagacgccggcaggcatttc
aagtgcgccttctgcaaagccaccactgaggtgccgatggagtacacgcagtacgtgaac
ggcacgcagcagtacgggcgggtgcccgccgagatggcgctcggcgcttacgaaatcgtc
gccactaaggagtactgccggaataacacgctaccgaacccaccggcggtcgtgttcgtc
atcgacgtgtcatacaactccatcaaaagcggtctactggattgtgtgtgcgagaacata
ctgagcattatagaggctatgcccaaagacgagcagacgggcaaaagctggacccgcgtc
ggattcatcacatacagttcaacagtacatttctacaacatcaagggcactctggcgcaa
ccgcaaatgttgtcagttggagacgtgtcggacatgttcgtgccgctgctggagggcttc
ctgtcgctgcccgaggacagcggcgccgtgctctcgtccctgctggctcagctgcccgcc
atgttccaggggaacaaggagacggagactgtcttgttgcccgccgttcaggccggcctc
gaagccctgaaagcggctgacacctcaggccaactcctagtattccacacgacgctgccc
acatacaacgctcctgggaaactcatcaacagggaggagaggaagttgctgggcactgac
aaggagaagcagatcttagcgcctcaaaccacagcctacaacgagctgggccaatcgtgt
tccgccgccggagtcagcgtggagttgtttgtgtgcaacaactcttatatagacgccgct
actataggccagctgccgagactgacaggcgggcaactacacaaatatacatactttacc
gtggacatcgacgggccgcgcctgctctcggacgtgtcgcgcgtgctggcgcggcccacg
gcgcacgacgccgtgatgcgcgtgcgcagctccacgggcgtgcgcgccaccgacttcttc
gggcacttcttcatgagcaacaccaccgacgtcgagctggccgctatcgattcggacaag
gccattggcattgaaattaaacacgacgacaaactgacaaacgaagatggcgtctacctc
caagcggctttgttgtacacccatcgcagcggccagcggcgactcagggtgcttaacctg
gctctcaacgtggctcaccagctcgctgacgtgtacaggagtgtggagttggacacctgc
atcaacttcctcaccaaacaagcggtgtgggcgctgcgggactccgccccgcgcgccgtg
agggaaggcctgtcgacccgctgcgcgcgctcgctggcctgctaccggcggcactgcgcc
tcgccctcctccgccggccagctggtgctgcccgagtccatgaagctgctgcctctctac
accaactgcctgctgcgctccgacgccattgctggaggtgactctctctctctctctcat
tatacacactgcgcctcgccctcctccgccggccagctggtgctgcccgagtccatgaag
ctgctgcctctctacaccaactgcctgctgcgctccgacgccattgctggaggtgactct
ctctctctctctcattatacacactgcgcctcgccctcctccgccggccagctggtgctg
cccgagtccatgaagctgctgcctctctacaccaactgcctgctgcgctccgacgccatt
gctggaggtgactctctctctctctctcattatacacactgcgcctcgccctcctccgcc
ggccagctggtgctgcccgagtccatgaagctgctgcctctctacaccaactgcctgctg
cgctccgacgccattgctggaggtgactctctctctctctctcattatacacactgcgcc
tcgccctcctccgccggccagctggtgctgcccgagtccatgaagctgctgcctctctac
accaactgcctgctgcgctccgacgccattgctggaggtgactctctctctctctctcat
tatacacactgcgcctcgccctcctccgccggccagctggtgctgcccgagtccatgaag
ctgctgcctctctacaccaactgcctgctgcgctccgacgccattgctggaggtgactct
ctctctctctctcattatacacactgcgcctcgccctcctccgccggccagctggtgctg
cccgagtccatgaagctgctgcctctctacaccaactgcctgctgcgctccgacgccatt
gctggaggtgactctctctctctctctcattatacacactgcgcctcgccctcctccgcc
ggccagctggtgctgcccgagtccatgaagctgctgcctctctacaccaactgcctgctg
cgctccgacgccattgctggaggtgactctctctctctctctcattatacacactgcgcc
tcgccctcctccgccggccagctggtgctgcccgagtccatgaagctgctgcctctctac
accaactgcctgctgcgctccgacgccattgctggaggtgactctctctctctctctcat
tatacacactgcgcctcgccctcctccgccggccagctggtgctgcccgagtccatgaag
ctgctgcctctctacaccaactgcctgctgcgctccgacgccattgctggaggtccagat
ttgacctgcgacgaccgctcctgcgccatgtacagagccctcacggcggacgtgagcact
tcagtcgtgtacacgtaccctagactgttgccgctacatgctggcaacactccgctccgg
gccagcgtggacaagatgagcgacaggggagtctatctgctcgagaacggcgtccacatg
ctggtgtgggtggggtcgcaggcgccgccggagttcgtgcgcgacgtgttcggagcggcg
tccgcgcagcagatagacgcgcaggtgtgcgagctgcccgcgctggacaacgcggccagc
gccagggtccgggcgctggtggacgacgcccgggtcaggaggagggcggctatgaggcta
acaataatgcgacaacacgacaaactcgagaccgttttgcgtcatttcctagtcgaagac
cgaggcgtcgacggcagcgcttcgtatgtggacttcctgtgtcatatacacaaggaggtc
agagcgctcctatag

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