Amyelois transitella (navel orangeworm): 106136561
Help
Entry
106136561 CDS
T09957
Name
(RefSeq) ribosomal RNA processing protein 1 homolog
KO
K14849
ribosomal RNA-processing protein 1
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atra01009
]
106136561
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atra03009
]
106136561
Protein phosphatases and associated proteins [BR:
atra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106136561
Ribosome biogenesis [BR:
atra03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106136561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
106136561
NCBI-ProteinID:
XP_013192608
LinkDB
All DBs
Position
30:complement(join(484444..484611,485337..486017,486723..486829,487570..487727,488272..488421,488747..488847,489788..489967,490531..490622,492140..492242,492696..492845,493964..494043,494818..495049))
Genome browser
AA seq
733 aa
AA seq
DB search
MRNKTKNMAKIKPRSKLNRQSQKIKKKVIVKPKKQEVLVVAQEIKFARLLSGNEKKSRDR
VLKTLKKWLVSCFQKGHEFKEDDFIRVWKGLFYAVWMSDKPLIQEELCENIAAILDQFPA
EQINYAVMMVKAGFKVLATEWYGIDHHRMDKFLMLVRRYLRGSLRCLHRCDWDLEACRKY
SNMLSGPDGVLAPKTPHYARNATSMIMHLIDCYLEELAKVSSGSIPDSSIVELLRPFATY
MCAGAAPPLVTASRRLLTALLRQSGPGARYEHAAAAWRMMGCPRGGPEALELELEDDDND
QTSDDEQDDEDDGEKPLDPRAGRVDVELPNLPVPARALAALLKDLLANASSKAHRRTKIC
LERFEKLANEEYPLPVEEVYGEDEKPATWRPQKAAKQLKITETRLVEQADELALRGLSRK
HRKRLLAKSRAGISIIEDVAKLKAGDETKNLGGDWTVESTEIKQNGDISNKENVQKRAKK
RIQKDTQKDSTKKRKMDSNDNAKKIKAEKKKNDRKINSIVNKRDNKLKKIKNSLALADSI
KNFFDNRAGANGNCDTEETAAVKNKNVNTVIVKNEQENVKVHEKPVKTLEKVDETTTTRK
TTKMVGNKNKLVENKNKMVENRKKMVENVVKTLVDKRKVNVAKNPTVVAKKVKNFQKQTA
SDKKQDLQKIMALGTPKRVKFVLKNNSAQLPAEYARAVRSRPAVPYDARKLPTKGNLKPS
APSARNPFTRNKK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcggaataaaactaaaaatatggctaaaataaagcctagaagtaaattgaacaggcaa
tctcagaaaatcaaaaagaaagtgatagtgaagcccaagaagcaagaagttctagttgtc
gctcaagaaataaaatttgcacggctgctttcgggaaacgaaaagaaatcgcgcgaccgt
gtactcaaaaccttgaaaaaatggcttgtaagctgtttccagaaaggacacgaatttaaa
gaagatgatttcatccgtgtatggaagggcctgttttatgcagtctggatgtcggacaaa
ccattaattcaggaggagctttgtgagaacatagcggccattttggatcaatttccagcc
gagcagataaactatgctgttatgatggtgaaggctggtttcaaggtgctggctacggag
tggtacgggattgaccaccatcggatggataagtttcttatgctggtgaggcgctacctg
cgaggcagtctgcgatgcctccacagatgcgattgggacttagaagcatgtagaaaatac
agcaacatgctttctggaccagatggtgtcctagctcctaaaacgccgcactacgctaga
aatgcaacatcaatgattatgcatttaatagattgttacctagaagagcttgctaaggtg
tcatcaggttcgattcccgactcgtccatagtggaattgctgcgtccgttcgcgacatac
atgtgcgcaggcgccgccccgccgctggtcacggcgagccgccgcttgctgacggcgctg
ctgcggcagagcgggcccggcgcgcgctacgagcacgcggcggccgcttggcggatgatg
gggtgccctcgcggaggcccggaggctcttgagctggaattagaagacgatgataatgat
cagaccagtgatgatgaacaagatgatgaagatgacggagagaagcctctggacccccgc
gcgggccgcgtggacgtggagttgccaaatttgcccgtgcctgcgcgtgcgctggccgcc
ctactgaaagatctactggccaacgcctcctctaaggcgcatcggaggacgaaaatctgt
ttggagagattcgaaaaactggcaaatgaagaatacccgttaccagtggaagaagtgtat
ggagaagatgagaagcccgccacttggaggccgcagaaggctgccaaacagctgaagatt
acagagactcgactggtggagcaggctgacgagctggcgctgagagggctcagtcgaaaa
catcggaaacgtctattagcaaaaagtcgcgccggcatcagcatcattgaagatgtcgct
aaattgaaggctggagatgaaactaagaatttgggtggcgactggactgtcgaatctacg
gagataaaacaaaatggcgatatatcaaataaggaaaatgtacaaaaacgtgcaaagaaa
cgcatacaaaaagacacacaaaaggacagtacaaaaaagcggaaaatggacagcaacgat
aacgcgaaaaaaatcaaagccgagaagaagaagaacgatagaaaaataaattcgatagtc
aacaagagggataataaattgaagaagatcaagaatagtttagcactcgccgacagcatt
aagaattttttcgataacagagctggcgctaatggaaattgcgacacggaagaaacagcg
gccgttaaaaataaaaatgtcaacacagtgatagttaaaaatgaacaggaaaatgtaaaa
gtacacgagaaacctgttaaaacattagaaaaagtcgatgaaacaacaacaacaagaaaa
actaccaaaatggtaggaaataagaacaagttggtagaaaataagaacaaaatggtagaa
aataggaaaaagatggtggaaaacgttgtgaaaacgttagttgataagaggaaagtgaat
gtggcgaagaatccgacagttgtcgcgaagaaagtcaagaattttcaaaaacagacagcc
agcgataagaaacaggatttgcagaaaatcatggcgttaggtacgccgaagagagtgaaa
ttcgttcttaaaaacaacagcgcacagttacccgcggagtacgcacgcgcagtacgttcc
cgccccgcggtcccttacgacgcgcggaaacttccgaccaagggaaatcttaaaccttct
gcgccgtcagccagaaatccctttactaggaataagaaatga
DBGET
integrated database retrieval system
