Amyelois transitella (navel orangeworm): 106136594
Help
Entry
106136594 CDS
T09957
Name
(RefSeq) protein VAC14 homolog
KO
K15305
vacuole morphology and inheritance protein 14
Organism
atra
Amyelois transitella (navel orangeworm)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vac14_Fig4_bd
Vac14_Fab1_bd
HEAT_EF3_N
HEAT_EZ
Cnd1
Adaptin_N
CEP104-like_TOG
Dopey_N
INTS1_R4
HEAT_ECM29
mTOR_dom
ParcG
TAF6_C
HEAT_DAAF5
RasGEF_N_2
Motif
Other DBs
NCBI-GeneID:
106136594
NCBI-ProteinID:
XP_013192648
LinkDB
All DBs
Position
19:complement(join(303543..303678,303905..304055,304770..304849,305356..305474,308346..308520,309739..309844,313309..313426,313646..313857,314298..314421,315449..315569,316786..317003,317480..317710,318732..318882,319247..319347))
Genome browser
AA seq
680 aa
AA seq
DB search
MSERDYAPLSIACVRGLCDKIYDKRKFAGVEIEKMVKDFSDANNTSQIKRLIRVLGQDLM
ASTNANVKNGALMGLSSVAVGLGKGCVTYLPELTQPIIACFSESESRVRYQAVEALFNVL
KIARAHSLPHFPVIFDALAKLAADPEAQVKQGAELLDRLVKDIVTESSSFDLAAFIPMVR
ERIYTRNAFARQFIISWVSVLDAVPDIDLVGYLPELLDGLFKMLDDANQEIRRMCDVQLN
EFLRSIKKDPSRADFQAMINILITHAQSPEELLQLTAITWIKQFVELSGAGMLPYASGIL
CAVLPCLAYSDESRKSIRETAATVNLQLTKLVASPGDGEGDGQGEGELQLDAVVDVLTNM
LHHASVHTKVAALDWFLHLYNKLPVQMYNQTDKVFMSLVGCLTDGSDEVVRRALAVLAEI
CSCNTDDLESSPYYHKFLQALLRLLAADDSLLEDRGAFIIRQLCVLLNAEAVYSALAAIV
PAHCAPRLARTVVDVLSCLLLTARELHELRLKLRNFDQPATHALFTRLYECWCHSPVSLL
ALCLLTHNYTHCNTLICTFGDLEITVDFLTEVDKLVQLIESPIFAYMRLELLAGAQSGPL
RAALSGLLMLLPQSAAFHTLRARLLAVPAGLAGAVCSKPLPAPANIDFESLLNKFQSVQA
AHREHSSLARRGKLLDNLPS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaagagattatgcgccgttgagcatagcctgcgtacgcgggctgtgcgataaa
atatatgataaaaggaagttcgctggtgtggaaatagagaaaatggtaaaagacttcagt
gatgcaaacaacacaagtcagatcaaacgtttaatcagagtgctgggtcaggacctgatg
gcgtctaccaacgctaatgtgaagaacggagccctcatggggttatcgtcggtggccgtt
ggattaggcaagggttgtgtgacttacctcccagagctgacgcagccaatcatcgcttgc
ttcagtgagagcgagtctcgtgtgcgctaccaagcagtggaggcgctgttcaatgtactg
aagattgcgcgggcgcactctctgccccacttccctgtcatatttgatgcactggctaag
ctcgctgcggacccagaggcacaagtgaagcaaggtgctgagcttctagataggcttgtt
aaggatatagtgaccgagagctcctcgttcgacctagcggcgttcatcccgatggtgcgc
gagcgcatctacacgcgcaacgcgttcgcgcggcagttcatcatctcgtgggtgtcggtg
ctggacgccgtgcccgacatagacctcgtcggctacctgcccgagctgctggacggcctg
ttcaagatgctggacgacgccaaccaggagatacggaggatgtgcgatgtgcaactgaac
gagttcctgcgcagcatcaagaaggatccgtcgcgcgcggacttccaggccatgatcaac
atcctcatcacgcatgcgcagtcgccggaggagctgctacagctgacagcgatcacgtgg
atcaagcagtttgtggagctctcgggggcgggcatgctgccgtatgcctcggggatcctg
tgcgccgtgctgccctgcttggcgtactccgacgagtccaggaagagcattcgcgagacc
gcggccacagttaacctccagctcaccaaactcgtggcgtcccccggggacggggagggg
gacgggcagggggagggggagctgcagctagacgcggtggtcgacgtgttgaccaacatg
ttgcaccacgcgtcggtgcataccaaagtcgccgcgttggattggttcctacatctttat
aataagctgcctgtgcagatgtacaatcaaacggacaaagtgtttatgagtctagtggga
tgtctgacggacgggtcggacgaagttgtccgccgggcgttggcagttctcgctgagatc
tgctcgtgtaacacagatgacctggagtccagcccttattaccacaaattcctgcaagca
ctattgcggttgttggcggcggatgacagtttgctggaagaccgcggagccttcatcatc
agacagctgtgcgtgctgctgaacgcggaggcggtgtacagcgcgctggcggccatcgtg
cccgcgcactgcgcgccgcggctcgcgcgcaccgtggtggacgtgctcagctgtctgctg
ctcaccgcgcgcgagctgcacgagctgcggctcaagctgcggaacttcgaccagcctgcg
acgcacgcgctgttcacccgcctgtacgagtgctggtgtcacagccccgtgtcgctgctg
gccttgtgtctgctcactcacaactacactcactgcaatacgcttatatgtaccttcggt
gacctggagatcacggtggatttcctgacagaagtggacaagctggtgcaactcatagaa
tctccaattttcgcatacatgcggctggagctgctggcgggcgcgcagagcgggccgctg
cgcgcggcgctgtcggggctgctgatgctgctgccgcagagcgccgccttccacacgctg
cgcgcgcgcctgctggccgtgcccgccggcctggccggcgccgtgtgcagtaaacccctc
cccgcccccgccaatatagacttcgaatcccttctaaataagtttcaaagcgttcaagcc
gcacatcgcgaacacagctcactagcgcgtcgcgggaaactactggacaacctaccctca
tag
DBGET
integrated database retrieval system
