Amyelois transitella (navel orangeworm): 106136702
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Entry
106136702 CDS
T09957
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106136702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106136702
03041 Spliceosome [BR:
atra03041
]
106136702
03032 DNA replication proteins [BR:
atra03032
]
106136702
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
106136702
Spliceosome [BR:
atra03041
]
Complex A
U1 snRNP components
Sm proteins
106136702
U2 snRNP components
106136702
Complex B
U1 snRNP components
106136702
U4/U6.U5 tri-snRNP components
106136702
Complex C
U2 snRNP components
106136702
DNA replication proteins [BR:
atra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
106136702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
106136702
NCBI-ProteinID:
XP_013192783
LinkDB
All DBs
Position
11:complement(join(8800026..8800117,8800707..8800881))
Genome browser
AA seq
88 aa
AA seq
DB search
MAAAMPINPKPFLNSLTGKSVLVKLKWGHEYKGLLVSADGYMNLQLANTEEIVDGSCTGN
LGEVLIRCNNVLYVRGSEEEDEEGEMKE
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctatgcccatcaaccccaaaccattccttaatagtttgactggaaagtca
gttttggtcaaattaaaatggggccatgagtacaaaggtctactagtttcagctgacggt
tatatgaaccttcagctcgccaatacagaagaaattgttgatggttcctgtacaggtaat
ctcggagaagtgctgatcaggtgtaacaatgtcctttatgtcagaggttcagaagaggaa
gacgaagaaggggaaatgaaagaatag
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