KEGG   Amyelois transitella (navel orangeworm): 106136803
Entry
106136803         CDS       T09957                                 
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106136803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atra03041]
    106136803
Spliceosome [BR:atra03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106136803
 Complex B
    106136803
 Complex C
   U2 SnRNP specific factors
    106136803
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Rad60-SLD Nop14
Other DBs
NCBI-GeneID: 106136803
NCBI-ProteinID: XP_013192906
LinkDB
Position
10:join(1730038..1730155,1732156..1732320,1733126..1733932,1734276..1734580,1734854..1735045,1735364..1735568,1736566..1736690,1737236..1737391,1738144..1738245)
AA seq 724 aa
MPSIDVMAPPGQGPEPAPEEPPPPPPPVIGIIYPPPEVRNIVDKTASFVARNGPEFEARI
RQNELGNPKFNFLNSGDPYHAYYQHKVKEIREGKGTEPTPAPAAPAVQRPGLAPATAARQ
QELLKAAVPAEPPPPRDPPPDFEFIADPPSISALELDIVKLTAQFVARNGRQFLTDLMKK
EERNHQFDFLRPQHSLFQYFTRLLEQYTKVLLPPKELVAKLSSEVRNGVLDQARSRAAWH
SYQARRKVADEARIEKERLAYASIDWHDFVVVETVDYPAGELGDFPPPTTPLEVGARVLA
QERGDDGGQGQDDDDTEMQIESETESESDDDLDEMEDRTQQQQRPDDNRVQDMEEESSSS
EDEGPPEPPPRPAGEEAPLPPRPDRVVVKKYDPKRDRPQPTPASEEWLVSPITGEKIPAN
KVADHVRIGLLDPRWLEQRDRAAAERTDRDEALAPGAAIEASLKQLAERRTDIFGVGDEE
TAIGKKIGEEEKRRDDRVTWDGHTSSVEAATRAARAHITLEDQIQQIHKVKGLLPDEEKE
KIGPKPVPGAARAPPPPRGAAPRPLPPVLLPPLPPLMVLPPLAPRPPLIPTPAFGFPAAP
PLPPAEEEEAPPAKRVRSEDALEPEPAWLARHAGAVHLQVVLPAQPERSEWRLDGRALAF
SVPLNTSVGELKNMLQRATNMPTAKQKLQYEGLFFKDTNSLAYYNVPPGAVIQLQVKERG
GRKK
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgccgtcaatagacgtaatggcccctccggggcaagggccggaacccgcgccagaagaa
cctccgccgccgcctccaccagttataggaattatttatcctccgccagaagtaaggaac
attgtcgacaaaactgccagcttcgtagcccgcaacggccctgaattcgaagctcgtatc
cgtcagaatgaactcggaaacccaaagttcaacttcttgaactccggagatccctatcat
gcctactaccagcataaggtcaaagaaatcagggaaggaaaaggtacagagccgaccccc
gccccagcagcccccgcagtgcagcgtccaggtctagcgcccgccaccgccgcgcggcag
caggagctgctcaaagccgccgtccccgccgagcccccgccaccccgcgacccgccacca
gatttcgagttcatcgcagaccccccatccatctccgcattagaactcgacatagtcaaa
ctcacagcgcagttcgtagcaaggaacggacgtcagttcctcacagatttgatgaagaag
gaggaacgcaatcatcagttcgacttccttcgcccccagcattcgctgtttcagtacttc
acgcgccttctggaacagtacactaaagtgcttttgcctccaaaagagttggttgcgaaa
ctgtcatctgaagtgaggaatggtgttttggatcaggctcgcagtcgcgccgcctggcat
tcgtatcaggcgcgtcgtaaagtagccgatgaggccaggattgagaaggagcggctggcg
tacgcctccatcgactggcacgactttgttgttgttgaaactgttgattatccagctggt
gaactgggtgatttcccaccaccaacaactccgttagaagttggggctcgtgtgttggca
caggaacgtggggacgatggaggtcagggtcaagatgatgatgacactgagatgcagatt
gagtcggagactgagtcagaatcggacgatgatttggatgaaatggaggaccggacacag
cagcaacagcggccggatgacaatcgcgtgcaggacatggaagaagagagctcgtcttct
gaagatgaaggtccaccggagccgccgccgcgtccggccggtgaagaagccccgctcccg
ccccgcccagaccgggtcgtcgtcaagaagtacgaccccaaacgggaccggccgcagccc
acgccggccagcgaggagtggctggtgtcgcccatcaccggggagaagatccccgccaac
aaagtggcggaccacgtccgcattggcctgctggacccgcgctggctggagcagagggac
cgcgcggccgccgagaggacggaccgggacgaggcgctggccccgggagcggccattgag
gcttctcttaaacagctcgctgagcgccgtacggacatcttcggcgtgggcgacgaggag
acggcgatcggtaagaagatcggcgaggaggagaagcggcgcgacgaccgcgtcacgtgg
gacgggcacacctccagcgtggaggccgccactagggctgcgcgtgcgcacatcacgctc
gaggatcagatacagcagatacacaaggtgaaaggccttctccccgacgaggagaaggag
aagatcggccccaagccggtgccgggcgccgcccgggctccgccgccgccgcggggcgcc
gcgccgcgcccgctgccgccggtgctgctgccgccgctgccgccgctcatggtgctgccg
ccgctcgcgccgcgcccgccgctcatacccacgcccgcgttcggattccctgcggcgccc
ccgctgccgcccgcggaggaggaggaggcgccgcccgccaagcgcgtgcgcagcgaggac
gcgctggagcccgagcccgcctggctggcgcgccacgccggcgccgtgcatctgcaggtg
gtgttgcccgctcaaccggagcgctccgagtggcggctggacggccgggcgctggccttc
agcgtcccgctgaacacctccgtgggggagctgaagaacatgctgcagagggctaccaac
atgcccactgccaagcagaagctgcagtacgagggtctcttcttcaaagacaccaacagc
ttggcgtactacaatgtgccgcctggcgccgtcatacagctgcaagttaaggagagaggt
ggtcgcaagaagtag

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