KEGG   Amyelois transitella (navel orangeworm): 106136876
Entry
106136876         CDS       T09957                                 
Name
(RefSeq) enhancer of mRNA-decapping protein 4
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106136876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106136876
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106136876
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     106136876
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st CPL DUF7310
Other DBs
NCBI-GeneID: 106136876
NCBI-ProteinID: XP_060802162
LinkDB
Position
2:join(1159019..1159053,1159702..1159907,1160548..1160654,1162048..1162154,1163025..1163170,1164517..1164713,1165356..1165468,1166228..1166538,1168340..1168446,1170302..1170446,1171132..1171241,1171842..1171921,1172843..1172922,1174307..1174446,1175889..1175991,1176421..1176561,1177387..1177578,1178672..1178804,1180100..1180280,1180736..1180901,1181853..1182015,1182624..1182738,1183602..1183822,1184444..1184633)
AA seq 1162 aa
MLPKLTDTTQTISFSEGDGVCSADVFATDVVVTSNAGNHNHGSSKVKLRNLVDYNWEPKF
YHGQLLAIHMSGKYMAYCIKATNPLNPGSWSGMVRVVYTPEPGTEKRSLIKGMKGVVQDL
AFAHIQNQVILACIDELGNFYVHEIEVTDGIRCTLLAEIREDTGVGGASARVVWCPYIPD
EDDTQDDDVARLLLTTHDNIARMWNMREVVSSLPGGAASPASALLAAGGGALQAAEHAAP
LVHAAFSPDGTALATAARDGCVMFFQVYMRNEASPRCLHKWQPHGGKPLSCLFFLDNHKN
YNTDVQFWKFAVTGAENNTVIKIWSCKSWNCMQTITFPASLGAEPPSPGLKAALDSSAGY
LLLSDFMSRSLYVMNLVWDVDDTTAYCKNIAEFLLPYPVLSFCIVDAEEEQVKCESSCDD
PFHRNGSNGDSPDTPDEFDMHNAEDGVGTASDNTPERRICLRLYIVQPKGLQEGELVYSP
PSAVQRDTLLQELSELSLDEKANDAPGIASSILQQQSQQLKNLLMRTQTQPGSLLCRAES
PSAAQLNLMTPDAFSSPGKRDEEDPPLSATPDVGAKSRTSIGACASEVGSASGAVAIAHD
VNPVSGGSSPSREVQQIMAHERDYYKDMEQKESPEEPAAAEQQLASAPLYADGFPPKPLV
HSNSDTSWPQISIAQINEANQRKASSDKGLSLTNSSGHAITMNSNNALTGNTSGPPLVNT
IGQPLATPSPPPAGAAPPSAAPPAPSAPPAPAALSPADRARLDSLDHKIDKLRELITAQS
HEVRALRAAAGSPRALDAALDEHARRAAAAVRAAMADGWQCVSQVSDTAARTAAHSAGLG
AARALEPLANALQHELATKLSATDQLLRENIDKLVTSKTVMERLSTAIAKSLSEMVRDSL
RAALMESVLPAMEKMHAQIFRQVNQAFQNGTKEFATNTEAAARAAAERGAAAASNNLCAA
LERHAAALAAHSAHAPQLAAAVRDLTHSVLEKELSWWREQARSVALQMSRAHTPATPAAH
APVDRQMQVANIQSLMNSGDANGAFQLALSASDLTLVVAACRACEPSAVFAPCKLKQHVL
LSLVQQLAADMTRDTHLKYRYLEEAVMNLDTSNPVTREHLPIVIRELQKQIVAFLNSSPG
HALTRQFKMLLMATESLVKATG
NT seq 3489 nt   +upstreamnt  +downstreamnt
atgcttccgaagctaacagatactacccaaactatatccttctcagagggagatggcgtt
tgcagcgcagatgtgtttgcaaccgatgttgtggttacctccaatgctggcaaccacaac
cacggcagctctaaggtcaaactccgcaacttggtcgactacaactgggagcctaagttc
taccatggacagctgctcgctatacacatgagtgggaaatatatggcatattgtataaaa
gcaacaaacccgcttaatccgggttcctggagtggcatggtccgtgtggtgtacacccca
gaaccggggacagagaagcgctcactcatcaagggaatgaaaggagtggtgcaagacttg
gcattcgctcacattcagaatcaggtgatactggcgtgtatagacgagctggggaacttt
tatgttcacgagattgaggtcacagatggtatcagatgcacactgttagcggagatccgt
gaagacacgggcgtgggcggcgcatcagctcgcgtggtgtggtgcccttacattcctgac
gaggacgacacacaagacgatgacgtggccaggctgctgttgaccacacacgacaatatt
gctcgcatgtggaacatgcgcgaagtcgtctcctcgctgccgggcggcgcggcgtcgccg
gcgagcgcgctgctggcggcgggcggcggcgcgctgcaggcggccgagcacgccgcgccg
ctcgtgcacgccgccttctcccccgacggcaccgcgctcgccaccgccgcgcgcgacggc
tgcgtgatgttcttccaggtgtacatgcgtaacgaagcgagcccaagatgtctgcacaag
tggcagccgcacggaggcaaaccactctcctgcctcttcttcctcgacaaccataagaat
tacaacaccgacgtacaattctggaagttcgccgtgaccggcgccgagaacaacacagtc
atcaagatatggtcgtgcaagtcctggaactgcatgcagacgatcacgttccccgcctct
ctgggcgccgagcccccctcgccggggctcaaggccgccctggactcgagcgccggctac
ctgctgctgtccgacttcatgagccgctcactgtacgtgatgaatctcgtgtgggatgtg
gacgacacgacggcgtactgtaagaacatagcggagttcctgctgccgtatccggtgttg
agtttttgtatcgttgatgcggaggaagagcaagtgaaatgcgagtcgagttgcgacgat
ccgttccacagaaatggctccaatggagactcgcccgacacaccggacgagttcgacatg
cacaatgctgaggacggcgttggtacagcgagcgacaacacgcccgagcgcagaatctgc
ttgcgactgtacatagtccagcccaaaggtttacaagaaggcgaattggtgtactcgccg
ccgtctgccgtacaaagagataccttattgcaggaattatcggagttatctttggatgaa
aaggcgaatgatgcaccaggcatagcgtccagtattctccagcagcagagtcagcagttg
aagaatttacttatgaggacacagacgcagccgggcagcctgctgtgccgcgcggagtcg
cccagcgccgcgcagctcaaccttatgacgccggacgcgttcagttctcccgggaagcga
gacgaagaagatccgccgctgtcggccacccccgacgtgggggcaaagtctcgtacatca
attggcgcgtgcgcatcggaagtggggagcgccagcggcgcagtggcaatagcgcacgac
gtcaacccggtgtccgggggctccagccccagccgcgaggtgcagcagatcatggcgcac
gagcgggactactataaggacatggagcagaaggagtccccggaggagccggcggcggcg
gagcagcagctggccagcgcgccgctgtacgcggacgggttcccgcccaagccgctggtg
cattccaacagtgacacgtcatggccgcagatttccatcgctcaaatcaacgaagccaac
cagcggaaggcttctagtgacaaaggtctatcattgaccaatagcagcggccacgccatt
actatgaatagcaacaatgctctgacaggcaacacgagcggccctccgctggtcaacacg
atcgggcaacccctggctacgcccagccccccgccggcgggcgcggccccccccagcgcg
gcgccccccgcaccctccgcgccccccgcgcccgcagccctatcccccgccgacagggcc
aggctcgacagcctggaccacaagattgacaagctgagagagttgataacggctcagagt
cacgaggtgagagcgctgcgcgccgccgcgggcagcccgcgcgcgctggacgcggcgctc
gacgagcacgcgcgccgcgccgccgccgccgtgcgcgccgccatggccgacggctggcag
tgtgtatcccaggtcagcgacaccgcggcccgcaccgccgcccactcggcgggattggga
gcggcccgcgctttagagccactggcgaacgcgttacaacacgaactggccaccaagttg
agcgccactgaccagctattgcgggagaacattgacaaactggtcactagcaagacggta
atggaacgcctcagcacagccatagccaagtccctgtcggagatggtccgcgactccctc
cgcgcggcgctaatggagagcgtactgcccgcgatggagaaaatgcacgcgcaaatattc
agacaggtcaatcaggcgttccagaatggcactaaggagttcgcaacaaacacagaagcg
gcggcccgagcggcggccgagcgcggcgccgcagcggccagcaacaacctgtgcgccgcg
ctcgagcgccacgccgccgcgctcgccgcgcactccgcgcacgcgccgcagctggccgcc
gccgtgcgcgacctcacgcacagcgtgctagaaaaggagctgtcatggtggcgggaacag
gcccgcagtgtggcgctgcagatgtcgcgcgcgcacacgcccgccacgcccgccgcgcac
gcgcccgtcgaccggcagatgcaagtagcgaacattcaatcgctaatgaacagcggcgac
gctaacggcgctttccaactagcgctgtcggcgtcagatctgacgctagtggtggccgcc
tgccgcgcttgcgagccctcggcggtgttcgcgccgtgcaagctcaaacagcacgtgctg
ctgtcgctggtgcagcagctggcggccgatatgaccagagacacgcatctcaagtatagg
tacctagaagaagccgtaatgaacctggacacgtccaatccggtgacccgggaacacctg
cccatagtcatccgggagttgcaaaagcaaatagtcgccttcctcaactcgtccccggga
cacgcgctgacgaggcagttcaagatgctgctgatggccacggagtccctggtgaaggcc
accggctga

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