| Entry |
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| Name |
(RefSeq) flap endonuclease GEN
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| KO |
| K15338 | holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] |
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| Organism |
atra Amyelois transitella (navel orangeworm)
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| Brite |
KEGG Orthology (KO) [BR:atra00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:atra03400]
106136908
DNA repair and recombination proteins [BR:atra03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106136908
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:complement(join(7653610..7654538,7655515..7655592,7655957..7656101,7656362..7656530,7657577..7657738,7658267..7658399,7659014..7659167,7659626..7659715,7660109..7660313,7660813..7660907,7661020..7661082))
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| AA seq |
740 aa
MGIKGLWTVLSPYSEKKSLHEIRGETIAVDLSGWVCDSQNVTDYYIQPKLYLRNLFFRTV
YLILADINPIFVLEGDAPELKRDVMAARNAIQFKGAAPKSDTASTKRPDVGRKRFKGVLK
ECETLLKHMGIRCVKGRGEAEATCAQLNSQGLVDAVVSQDSDCFAYGARRVYRNFSVSSS
AGGGAMQGSVDCYDADLMFRSNGFGRNKMVALAILCGCDYGVGACGSSITTVVSFLHTVP
DGEVIPRLLSWVSDPEHYEEQTRFVSAPGRCDRCGHVGRAHLKNGCPVCATHRGCSDLGH
KSKVSEVKRELSLRNRALSCGVPFPEPKVMKEFLNATPERIDLDSLKYPVPSLIQFVKLM
SRKLDWSEKYCVEKYMPVLTKWHLQDNVPNRTIKPLVIKKKRNPRGVPSFEVVWGDIDGQ
YEALIPDELFGEDEDHSKPWTTTERQDLMRQYYPELVEAYEESIKKPPKTKKPRATKNKD
GAEKPKRKYNRKVKKLIDVEIANLSGSLKNLDLTAKTTEINSSKNNVSVCVNKLKRKFKS
TKGRQKTIDSFIAKKKRKSIQKAMHSLRCSLNNISINEPNYFLHSGGSSDKENKNEIEHL
LSMSCASGDEIDDSDLSNLVDKIVNRPPCTKNAKVDNNLVKLIFESKFSTPKKLKRNNVL
KEANYFSTPKESPIKRNSLKLCRNISNVSVHCKANTSYFFDKLTEDRDAFEMSLEYKHKS
AIISLDCDTTVEYSLPDVCL |
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| NT seq |
2223 nt +upstreamnt +downstreamnt
atgggtattaaaggcctgtggactgttttatcgccttacagcgaaaagaaatctcttcat
gagattcgaggtgaaacaattgcagtagacttatctgggtgggtttgtgatagccaaaat
gttacagattattacattcaaccaaaactttacctcagaaatctattcttcagaacagtt
tacttaatactggctgatataaacccaatatttgtactggaaggtgatgctccagaattg
aaaagagatgtgatggcagcacgtaatgctattcagtttaagggagctgctcctaagtca
gatactgcatctactaaacgtcctgatgtgggaagaaaacgatttaaaggagttcttaaa
gaatgtgaaaccctcctgaaacatatgggaatcagatgtgtcaaagggagaggagaagca
gaagccacatgtgcacagctgaactctcaaggtctggttgacgcagtagtgtcccaagac
tcggattgcttcgcatacggcgcgcggcgagtgtaccgcaattttagcgtttcaagctcg
gctggtggtggcgccatgcagggctctgtggactgctacgatgccgacctcatgttccgc
agcaatggttttggacggaacaagatggtggctttggcgatcctttgtggctgcgattat
ggcgttggcgcatgtggctcatccataacaactgttgtttcgttcctacacactgtaccc
gatggagaagtaattcccaggttactttcctgggtgagcgatcccgagcactacgaggag
cagacccgcttcgtgtcggcgccgggccgctgcgaccggtgcggacacgtgggaagggca
catttgaaaaatggctgcccggtctgtgcgacacatcgcggatgcagcgacttaggacac
aaatcaaaagtgtctgaagtcaagcgtgagctgtcacttcgcaacagggccctctcctgc
ggcgtgccttttccggagccgaaagttatgaaggaatttctgaacgcgaccccagagaga
attgatctcgacagtttgaaataccccgtgcccagtctgattcaatttgtgaaactgatg
tccagaaagttggattggtcggaaaaatactgtgtagagaagtatatgcctgtgttgacg
aaatggcatcttcaggataacgtcccaaatcgaactatcaagccgttagtgataaaaaag
aaacgaaaccctaggggtgtgccgagtttcgaagtggtttggggcgatatcgacggccag
tacgaagcgttgattccggacgaactctttggagaagacgaagaccattctaaaccttgg
acgacgacggagcggcaggatttaatgcgacaatattaccctgaacttgttgaagcctac
gaggagtctataaaaaagccgccgaaaacaaagaaaccgcgagccacaaagaacaaagat
ggcgccgagaaacctaagcgaaaatacaacagaaaggtcaaaaaactcattgatgtagaa
attgccaatctcagtggatccctgaagaatttagatttaacggcgaagaccaccgagatt
aattccagtaagaataacgttagcgtctgcgtgaataaactgaaaaggaaattcaaaagc
acaaaaggcagacaaaagactattgatagttttatagcgaagaagaaacgaaagtccatc
caaaaggcaatgcactcattgagatgcagcttgaataatatttctataaatgaaccaaac
tatttcttgcatagtggtggttcttcggacaaggagaataaaaatgaaatcgaacaccta
ttgagcatgtcctgtgcgagtggagacgaaattgatgatagcgatttatctaatctagtt
gacaaaatagtcaatagaccgccttgcacgaaaaatgcaaaagtggacaacaatttagtc
aaactaatattcgaaagtaaattttctacgcctaagaaattgaaaagaaataatgtatta
aaagaggctaattatttttcgacgccaaaagaaagtccgataaaaagaaacagtttgaaa
ttatgcaggaatatttcaaatgtttctgtgcactgcaaagcgaacactagttatttcttt
gacaagttgacagaggaccgcgacgcctttgaaatgtctctggaatacaaacacaagagt
gctatcataagtttggactgcgatacaacggttgaatacagtttgcctgacgtatgttta
taa |
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