Entry |
|
Name |
(RefSeq) sodium channel protein Nach
|
KO |
K03440 | acid-sensing ion channel, other |
|
Organism |
atra Amyelois transitella (navel orangeworm)
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Brite |
KEGG Orthology (KO) [BR:atra00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:atra04040]
106136922
Ion channels [BR:atra04040]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
106136922
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
4:complement(join(9142337..9142425,9142774..9142883,9143184..9143283,9143573..9143626,9144055..9144145,9144340..9144549,9144650..9144734,9145027..9145172,9145488..9145633,9146062..9146251))
|
AA seq |
406 aa
MFWLLIVLASAGCLYLLLLSDERDALNFTPDTLYLPWATTFPAVTVCEIYNAREAPKKLG
EKYPNYVKHLSFDYKKYIAAIIFGHGTCSRSFCVPCGDKVPCDLPFRTIAEDYHIFQIRL
KCTELLSDCFFNGVEFPCCDRFHIVDSEYGPCFALNTLQSENSQLDSLLKVNLTTGPGKL
DFRISSDAEIAVHSPEELATLGLDPKFKVEVRLHMENRVEYLFSVVEIENDKVLTREDLS
IRGCRYLKEKPRDDFYKYPVYGYGACKLAQQTKNIFGHCKCVHPIRHKAYEKKYCNYTGI
HCVVHYEFEKAQSGVDKNALIADQCLPSCEESELKTVHVSKRWLPEEYGKGTITIRMTSL
PSLRFQRNLITSNLDIVVNVGGMFSLFFGASIFSLVEIFYLVFRKQ |
NT seq |
1221 nt +upstreamnt +downstreamnt
atgttctggctgctgatagtcctggcatcagccggatgtctgtatttgttgctgctgtcc
gatgaacgagatgccctgaacttcacccctgacaccctctacttaccctgggccaccacc
ttcccggctgtcacagtttgcgagatatataacgcgagagaagccccgaagaagcttggc
gaaaaatacccaaattatgtgaaacatctaagcttcgactacaagaaatatatcgcggcg
ataatatttggtcatggcacgtgtagcaggtcgttttgtgtgccctgcggagacaaggtg
ccctgtgacttgccatttagaaccatcgccgaagattatcacatatttcagatacgtctg
aaatgtacagagttactatcggactgtttcttcaacggggtagagtttccatgctgcgat
agatttcacattgtcgattcggagtacggcccgtgtttcgcactgaacacactgcaaagc
gagaattcacaattggactcacttttaaaagttaatttaactactggtccaggaaaactc
gattttcgtatttcttctgacgctgaaatcgctgtgcatagtccagaagagttagctaca
ttgggtttagatcccaagttcaaggttgaagtgaggctgcacatggagaaccgagtagag
tatctcttctcagtggtggagattgagaacgacaaagttctaacccgggaagatctgagc
atccggggatgccggtatctgaaagagaaaccaagggatgatttctataagtatccagta
tatggttatggtgcctgtaaacttgctcaacaaactaaaaatatatttggtcactgcaaa
tgtgtccatcctatcaggcataaagcctatgaaaagaagtactgtaattacacaggcata
cattgtgtggttcattatgaatttgaaaaagcgcaatcgggtgtggacaagaatgctttg
attgcggatcagtgcctgccttcttgcgaagagagtgaactgaagactgttcacgtttca
aagaggtggctaccggaggaatatggcaaggggacaattacaatccgcatgacatcgctc
ccttccctgaggtttcagagaaacctcatcacttccaatctagacattgttgtgaacgtg
ggaggaatgtttagtttattcttcggagcatctattttcagtctagtggagatattttat
ctagtttttagaaagcagtaa |