KEGG T09957: 106136980

Amyelois transitella (navel orangeworm): 106136980

Entry

106136980         CDS       T09957

Name

(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta

K11583

serine/threonine-protein phosphatase 2A regulatory subunit B''

Organism

atra Amyelois transitella (navel orangeworm)

Pathway

atra03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:atra00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106136980
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:atra01009]
    106136980
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106136980
   03036 Chromosome and associated proteins [BR:atra03036]
    106136980
Protein phosphatases and associated proteins [BR:atra01009]
Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     106136980
Messenger RNA biogenesis [BR:atra03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     106136980
Chromosome and associated proteins [BR:atra03036]
Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     106136980

SSDB

Motif

Pfam:

EF-hand_13 P2R3B_EF-hand EF-hand_7 EF-hand_5 EF-hand_6 EF-hand_1 DUF4187

Other DBs

NCBI-GeneID:

106136980

NCBI-ProteinID:

XP_013193153

LinkDB

Position

4:complement(join(9018337..9018997,9021274..9021356,9021765..9021929,9022432..9022558,9022840..9023008,9023320..9023420,9024322..9024464,9024906..9025083,9025364..9025500,9036493..9036702,9106366..9107256))

AA seq 954 aa
MAATARREIDTGEEDIAAIAKQISDHAEAIYQTWKARGLAPTEILSCRPAPQLKLAESLR
TKPKPEPKPDLKQRPEFRREHRPEILREQRSEVKREQRQESRREIRPEPEGETIEVILPP
DLVPQRNGTEGVGGGARRPDPAAMRLEVAREEERLLRALRTGGVVAERSAERPDVVPPIS
LVDYAKSRYQDRLDTGARKPAAGASGERRASLGSHVTEARSKFEARARRASSAGAGETTT
AAGGATPVRPFLTRGSVAERVLMFERCPSEATLELAKRKSPAATTWRGPHDVINKAQNYA
ASTPPKPSSAPAHTTLQRTVRGAANSGAPARVIPRFHFPKGRPPPAHQQDHALHKVQSAF
ATFPNSQVPRESFKHIVKACECPLYWKMPLFLATQQSLHAPVDGHKFIDFWREMTSNCHD
QASRFVYILTRGKSNTLAQEDFVPLVQDVVDTHPGLSFLKEATEFHSRYVHTVIARIFYC
VNRSWSGRISIPELRRSNLLQVIQLLEDEEDINQVTQYFSYEHFYVIYCKFWELDRDHDL
FIDKHDLARHNDHALSSRMIERVLSGCVTRGNQNRLTPDGEPRMSYTEFVWFLLAEEDKT
HPTAIEYWFRCMDVDGDGYISMYELEYFYEEQMQRMEAIGIETLPFNDCLCQMLDMVHPA
EEGKITLTDLKRCKLTPIFFDTFFNLEKYLDHEQRDPFATQRDSDCEMSEWDRFAAEEYE
LLVAEEGGSDAQDQISYDETDEGLSPNMDDYTNTEVVEDSSVEESTLSEGGPLWREPTSA
GFVNLSSIYSIGGNDKWANQPNKNGFPDKKLPEKPVPPEKPVSLMMVNGKTDNRYAGFGN
NSFLYSHLLTGGARAKDPPSYTAATSGALFEKERATSPKPKSPVTSPVNGVNKISDNYER
AVAERLSPQRETARNRSSLFSKVNTGIVSSKIKKNIRNDEDDEDYARDSDECSI

NT seq 2865 nt +upstreamnt +downstreamnt
atggcagccacggctcgccgagagatcgacaccggcgaggaggacatcgccgccatcgcc
aaacagatatcggatcatgctgaggccatttaccagacgtggaaagcgcgcggcttagca
ccaacagagattttatcttgtagacctgcaccgcaattaaagctggcggaaagtttgcga
actaaacccaaaccggagccaaagccggatttaaagcaaaggcccgagtttagacgggaa
caccgaccagaaatattaagagaacagaggtccgaagttaaaagggaacaaagacaggag
tcccgacgagagatacgtccagagccagaaggagaaacaatagaagtaatactacctcca
gatctagtgccgcaaagaaatggtacagaaggagtaggtggtggcgctaggcgcccggat
cccgcagcaatgcgtctagaagtagctcgtgaagaagagcggcttctccgtgcattgcgt
acaggaggagtagtagcggaacgatcagccgaaaggcctgatgttgtaccgccaatttcc
cttgtagactatgctaaaagtagatatcaagatcggcttgacactggagccagaaagcct
gcagccggagcaagtggcgaaaggcgagcttctcttggctctcatgttactgaggctaga
tctaagtttgaggcacgagctcgtcgagcttcgagtgctggtgctggtgaaactacaaca
gctgctggaggagctacaccagtgcggcctttcttaactcgtggttcggtcgctgaaaga
gttttgatgtttgaacgatgtcctagtgaagctacacttgagcttgctaaaagaaaatct
ccagcggctacgacgtggcggggaccccacgatgtcatcaataaagcacagaattacgca
gcttcaacgcctccgaagccgtcgtctgcgccggcgcacacgactctccagcgcacagtc
cggggcgccgccaatagtggggcgcccgcgcgggtcatcccccggttccacttccccaag
ggccggcccccgcctgcacaccagcaggaccatgcactacataaagtgcagtccgccttt
gccacatttcctaatagtcaggttcctcgcgagagcttcaagcacatagtgaaggcgtgc
gagtgcccgctgtactggaagatgcccctcttcctcgccacacagcagagtctgcacgcc
ccagtagatggccacaaattcattgatttctggagagaaatgacttcaaactgccacgac
caggcttctcggttcgtgtacatccttacccggggtaaaagcaataccctggctcaggag
gacttcgtgccgctggtccaggacgtagtggacactcacccagggttgtccttccttaaa
gaagcaacagagttccactcaagatatgtgcatactgtgatcgctaggatattttattgt
gtaaaccggtcttggtccggtaggatatcaatccctgagctgaggaggtcaaatcttctc
caagtcatccaattgttggaagatgaggaggacattaaccaagtcacacaatactttagt
tatgagcatttctacgtaatctactgcaagttctgggagctggacagagaccacgacttg
ttcattgacaaacatgatctcgcgagacataacgatcacgcattatcgagtcgtatgatc
gagcgagttttgtccggctgcgtgacgaggggtaaccagaacagactgacacctgatggt
gaacccaggatgtcctacactgagttcgtgtggttcctcctagctgaagaagacaagact
catcccactgccatcgaatactggttcagatgtatggacgtagacggcgatggatacata
tccatgtacgagttggagtacttctatgaggagcagatgcagaggatggaagccatcggt
attgagacattgcccttcaacgactgcttgtgccagatgctggacatggtccacccagcg
gaggaaggcaagatcaccctcactgacctgaagaggtgcaagctgactccaatattcttc
gacaccttcttcaatttggagaaatacctggaccacgagcaacgtgaccccttcgccaca
cagagggactctgattgcgagatgtcggaatgggataggtttgcagctgaagaatatgaa
ctgttggtggctgaggagggtggcagcgacgcgcaggatcaaatctcttacgatgaaaca
gacgaaggtctttctcccaacatggatgactacactaacactgaggtcgtcgaggactcc
agcgtggaagaatcgactttaagcgagggtgggcccttatggcgcgaaccaaccagcgcg
ggctttgttaatcttagctcaatatactccattggcggtaacgacaaatgggctaatcaa
ccgaacaaaaatggcttcccagataaaaaactccctgagaaacctgtcccacccgaaaaa
cctgtcagcctcatgatggtcaatggaaagacggacaatagatacgccggcttcggtaac
aacagctttctatactcccatttattaactggcggcgctcgagccaaagatccaccttcg
tacacggcagcgacaagcggggcactattcgaaaaagaaagagcgacgtctcctaaacct
aaatcaccagtaactagtcccgttaatggagttaataaaatatctgataattatgaaaga
gctgtcgctgaaagactcagtcctcaacgggaaaccgctagaaaccgcagtagtctgttc
agcaaagtgaatactggcatcgtttctagtaaaattaaaaagaatattcgaaacgacgaa
gacgacgaggattatgcgcgcgatagtgatgagtgctctatatag

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