KEGG   Amyelois transitella (navel orangeworm): 106137291
Entry
106137291         CDS       T09957                                 
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A
  KO
K10728  topoisomerase (DNA) II binding protein 1
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    106137291
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atra03032]
    106137291
   03400 DNA repair and recombination proteins [BR:atra03400]
    106137291
DNA replication proteins [BR:atra03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    106137291
DNA repair and recombination proteins [BR:atra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     106137291
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5 ECT2_BRCT0 TopBP1_BRCT0
Other DBs
NCBI-GeneID: 106137291
NCBI-ProteinID: XP_060810471
LinkDB
Position
4:join(11236522..11236611,11237856..11238007,11238577..11238709,11239166..11239273,11239530..11239590,11239858..11240056,11240915..11241090,11242577..11242674,11243165..11243287,11244933..11245160,11245962..11246142,11246654..11246785,11248233..11248411,11249149..11249327,11250103..11250302,11251513..11251683,11252725..11252844,11254089..11254238,11255253..11255404,11256664..11256765,11257476..11257526,11259952..11260156,11261280..11261416,11262117..11262317,11263179..11263402,11264392..11264587)
AA seq 1315 aa
MTEDIKVTFIIPRNCRSENECSEEMQLAFTACEQHSGGGLKAQFVHESNYTKFDGLTKKD
VFVLNEFDGELYEKLKTTKCLLVGPRCLSCCLTEGVPIPSGPEPVFTVAMRGLVVTASGL
SKQQKETIKKKVHWMGGIYSVVLTDETTHLVSNTVLSDKYIKSVEKGIPVMAESWIHAVW
EASLSLNVRGSSSDFDDHKLPPFANLQVTTSGITKKDKQMIMKLVNEYGGTFSGAFQSET
TDIVILTKEGIGSEKYKAAIEYGKACVVPAWVKESAASGAALPLSRYRVAGASTSSPLAE
HRLPDMSLNFSRITNLRPPSNFVDETRAADMSTLSGKMKLSQDSKKSNDSSVIDKELQTA
FENFDMSLIKKAGPIFDGFCIWVTGLEGVSRERAAAMVSKCGGVRYDCPHERVTHAVAGT
KGAAASVGLACPNVPILSPMWLLKSVIEGRALDEAEFLIDAKPATPVKSTRKPRIEPASP
MSKRNIQLLRRGPLDLPPPTPERPERNDEIVNHYLSQVVEPEPASEKTPEKPEPNVTLPL
PQDITDDVEEPTEEVEQIFAGMKLEVQGLDEEAICEIGAEVAAAGGVLLAGGAPGARRLV
PLDFDPDPAGGAEAVTVFWIKDCLSQQELLPIQYYHRPVKLPQWSPGAPLPLEGVVASLS
TYSGVERAFLDELAKLLGATTQLRFCRRNTATAQASTHLICPTPSGDKYQGALKWGLPAV
TADWLMQCAKEGRRVSERNYLVGDTKAPPSPEKPSEEPMVEQAHEQTNVTTDKENAMLPP
EGAVLPRRSSAPSREQTPKHKATAVDDMSPASRYIAMARQGLLGGDSQETPKRIQDLKDD
ARQDVECGVRTPPLDDALSTPNLRGLSPTTRRRLQAVRRGEMPSDPIRTPADPFDKNPET
PDSAFGAALRPGSGRLSPEARKRLWKVVQDLPSKETHPIKEKHTPLSEIRNRFLAQFNGD
APTPPSDHTLAPRKLHLQDQADTPPAKIAKISIDQSAGGGIISDIDETSKSASNSTKSSS
SSALPLVVDAQLQRLSAALSSRLSSQRARRTRDSLTLAPPSNAEAGPESQPNTVGWDDTT
PAQNAQCEPVAETAPAPAVKRFMLSSNVDNREEIIEMIQYLGGEVCEGAELDPAATHLLC
AAPGRSEKMLGSVAAGRWVLHPAYIPRSRACGKFVSEEEYEWGNPLAASLPSLSGAESQL
ARAAHRWRSARAHGRPGPLAGVAALLHVPPARRRLLARLVLAGGGAAPDLQPPYNDESIT
VCFADLKRYPISERDAAWLMSRKIPVCPPVLLSSYLTDETPPVPEEHCLPEFKPK
NT seq 3948 nt   +upstreamnt  +downstreamnt
atgactgaggacataaaagttacgttcatcattccaagaaactgccgaagtgaaaatgaa
tgttctgaagaaatgcagctcgcatttaccgcctgtgagcagcatagcggaggtggactc
aaagcccaatttgtgcacgagagcaactacaccaagtttgatggcctcactaagaaggac
gtgtttgttttgaatgaatttgacggagagctgtatgagaaactgaagaccaccaagtgt
ttactggtcggacctcgttgcttgtcatgttgtctgacggaaggcgtgccgataccgtct
gggcccgaaccagttttcacagtggctatgagaggccttgtagttacagcgagcggcttg
tctaaacaacaaaaagaaacaataaaaaagaaagtccactggatgggaggcatatacagc
gtggtgcttacagacgagacgacacatctcgtctccaatactgtattgtctgataaatac
attaaatcggtcgaaaaaggcattccggtaatggctgagtcgtggattcatgcggtctgg
gaagcctctctaagtctcaatgttagaggttcatcgtcagacttcgacgaccacaaactg
ccaccatttgccaatttacaagtcaccacctcaggcataacgaagaaggacaagcagatg
ataatgaaactggtgaacgagtacggtggaacgttctccggtgctttccagagtgagacc
acggatattgttatattgacaaaagaaggcataggcagcgagaaatacaaagcggccata
gagtacggcaaagcgtgcgtggttcccgcctgggtgaaggagtcggcggcgagcggcgcg
gcgctgccgctatcgcggtaccgcgtggcgggcgcctccacctcgtccccgctggcggag
caccggctgcccgatatgagcctgaacttctctaggataacgaatttgagaccgccaagt
aatttcgtggacgaaaccagggcggcggacatgtcaactctatctgggaagatgaagttg
tcacaagattccaagaaatccaacgattcgtccgtcatcgataaagaattgcagactgct
tttgagaatttcgacatgagtttaatcaagaaggctggacctatattcgatggattctgt
atctgggtgacaggactcgaaggcgtgagtcgcgaacgcgccgcagcaatggtctctaaa
tgtgggggagtcagatacgattgtccccacgaaagggtcacccatgccgtagcggggact
aagggagccgctgctagtgtagggctagcgtgccctaatgtacctatactgtcgcctatg
tggctgttgaaaagtgtaatcgaagggcgagcattggatgaggcagagttccttatagac
gcaaagccggccacgcccgtgaagtctacacgtaagccgcgcatcgaacccgcgtccccg
atgagcaaacgcaacatacaactgctgcgccgcgggccgctggacctgccgccgcccact
cccgagcggccggaacggaacgatgagatcgtcaaccattatcttagtcaagtagtggaa
ccagaaccagcgagtgagaaaactccagagaaaccggaaccgaatgtgaccttaccccta
ccacaggacatcactgatgacgtagaagagcctaccgaagaagtggaacagatatttgca
ggcatgaaattggaagtgcaaggcttagacgaggaggcgatatgtgagatcggcgcggag
gtagcggcggccggcggcgtattgctggcgggcggggcgcccggggcgcgccgcctggtg
cccctcgattttgacccggacccggcagggggcgctgaagccgtcactgtcttttggatc
aaagactgtctctcgcaacaagagctactccccatacaatactaccaccggcccgtgaag
ttgcctcaatggagccccggcgctccgttgccgctagagggcgttgttgctagtttgagc
acttatagcggagttgagagggcgtttttggacgaattggccaaattgctgggtgccact
acccaactccgtttctgccgacgcaacacggccaccgcccaggcttccacccacttgata
tgtcccacgcctagcggggacaaataccagggtgccttgaagtgggggttgcccgccgtc
accgctgattggctgatgcaatgcgcgaaagaggggagaagagtgagcgagagaaactac
ttagtgggagacactaaagcgccaccttctcccgagaaaccttcggaggagccgatggtg
gaacaagcacacgaacaaacgaacgtgacgacagacaaagagaacgccatgttgccgcca
gagggcgctgttctgccgcgacggagttcggcgccgagcagagagcaaactcctaaacat
aaagctacagccgtagacgatatgtccccagcgtctcggtatatcgcgatggcccgccaa
ggactgcttggcggcgattcccaggagactcccaagagaatacaggatttgaaggatgac
gcaagacaggatgtcgaatgcggagtccggacgccgcctttggacgatgccctatcgacg
cccaatctccgaggtctaagccccaccaccagacggagattgcaagcggtcagacgtggg
gaaatgccttcagatcctatacggaccccggcggatcctttcgacaagaaccccgaaact
ccagacagcgctttcggagccgcgctaagaccaggctcgggaagattatctcccgaagcc
cgcaaaaggctgtggaaagtcgttcaagacctaccttctaaggagactcatcctatcaaa
gagaaacatacgccgttgtccgagatccgcaaccggttcctggcacagttcaatggtgac
gcgcccacaccgccttcggaccacacactggccccaaggaaattacatttgcaggatcaa
gctgacacgccgccagctaaaattgcaaagatttcgatagatcaaagcgccggaggcgga
ataataagcgacattgacgaaacatctaaaagcgcttcgaattccaccaaatcgagttcg
tcaagcgctttacctttagttgttgacgctcaactacagcggctcagtgcagcgctgagt
tcgcgactgagctcacagcgggcgaggcggaccagagactctttgacgctagcaccgcct
tctaacgcagaggcgggcccggaatctcagcccaatacagtgggatgggatgacaccacg
ccggcgcagaacgcgcaatgtgaacccgtcgctgagacagcgccagcgccggccgtaaag
cgattcatgctgtcttctaacgttgataaccgcgaagaaataatcgaaatgatccaatac
ctgggcggcgaagtgtgcgagggtgctgaattggacccggcagcgactcacctactctgt
gcggcgccgggccgctccgagaagatgctgggctctgtggcggccggccgctgggtgctg
cacccggcttatataccgaggagcagggcgtgcgggaaatttgtatcggaggaagaatac
gagtggggcaaccctctagctgcctccctcccctcgctgtcgggcgcggagagccagctg
gcgcgcgcggcgcaccgctggcgatctgcgcgtgcgcacgggcggccgggcccgctggcc
ggcgtggccgcgctgctgcacgtgccgccggcccggcgccggctgctggcccggctcgtg
ctggccggcggcggcgctgcgcctgacttgcagcctccatacaacgacgaatcaataaca
gtgtgcttcgctgacctgaaacgttacccgatatcggaacgggacgccgcgtggctcatg
tcccgcaaaatacccgtatgcccgccagtgttacttagttcgtatttaacggacgaaaca
ccgcccgtgccggaggagcattgcttgcccgaattcaagcctaaatga

DBGET integrated database retrieval system