KEGG   Amyelois transitella (navel orangeworm): 106137301
Entry
106137301         CDS       T09957                                 
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
  KO
K03138  transcription initiation factor TFIIF subunit alpha
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106137301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106137301
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     106137301
SSDB
Motif
Pfam: TFIIF_alpha
Other DBs
NCBI-GeneID: 106137301
NCBI-ProteinID: XP_060810489
LinkDB
Position
4:complement(join(10965700..10965910,10966812..10966932,10968213..10968332,10969306..10969454,10970337..10970402,10971052..10971160,10971616..10971735,10972125..10972243,10972927..10972995,10973683..10973784,10974601..10974735,10975853..10976028,10976112..10976132))
AA seq 505 aa
MSNPGSSQAPIVQEFKIRVPKNVKKKYHVMRFNATLNVDFAKWTHVKMERENNIREFKGM
EEEMPKYGAGSEYGRDVREEARRKRFGIQSRKYKVEDQPWILKVGGKTGKKFKGIREGGV
SENAAYYVFTHAADGAIDAYPLQEWYNFQPIQRYKALSAEEAEQEFGRRNKVMNYFSLMF
RKRMRGDEAADDADEDNEKKTKGKAKKDLKISDMDELMESGDDSSDSEAGEKEDSDSGAK
KAKDKKKVAATKKKKKVEDEAFEESDDGDEEGRERDYISDSSESESDHEMKVNKELKGVA
EEDALRKLLTSDEDSEEEQEQKQESEQDDEPTKEGEERASKLTKKKKKDDVKKDKESSSE
FSSDSDTDPESGGNKKSKKNKNEKNSDKNGAASSSAPGSASTSRAGTPPSAAAAAVAAAA
AAAHPAKRARLDPSYINECGVTEEAVRRYLARKPMTTTELLTKFKSKRTGVRSERLVETM
TQILKRINPVKQNINGKMYLSIKQS
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgagtaaccctggatcttcgcaagcaccgatcgtgcaggagttcaaaatacgtgtacca
aagaatgtaaaaaagaagtaccatgttatgcgtttcaatgcgaccctcaacgtggacttc
gcgaaatggacacacgtcaagatggagagggagaacaatatacgagaattcaaaggaatg
gaagaggagatgcctaaatatggtgcaggttctgaatatggccgtgacgtgagagaagag
gctcgtcgcaagcgattcgggatacagtcccgcaaatataaagttgaggatcagccatgg
attctcaaagttggaggcaaaactgggaaaaagttcaagggtatccgtgagggtggcgta
tcggaaaacgcagcgtactatgtgttcacacatgccgctgatggtgccatagacgcttat
cctttacaagagtggtataactttcagcctatccagcggtacaaggctttgtcggctgag
gaggccgagcaagaattcggaagacgcaataaggtgatgaactacttctcactgatgttc
cgcaagcgcatgcgtggcgacgaggccgcggacgacgctgacgaggacaacgagaagaag
actaagggaaaggctaagaaagacttgaagatatcagacatggacgagctgatggagtcc
ggagacgactcgtctgactcggaggccggcgagaaagaggactccgactctggagccaag
aaagcgaaagacaagaaaaaagttgccgccacaaaaaagaagaaaaaagtggaagatgaa
gcgttcgaggagagtgacgacggagacgaggagggccgcgagagggactacatctcggac
tcgtctgagagtgagtcggatcacgagatgaaggtgaacaaggaactgaagggtgtcgct
gaagaagatgcgctcagaaaactactgacttccgacgaggactctgaagaggaacaggaa
cagaagcaggagtcggaacaagatgacgagcccaccaaagagggggaggagagagcgagc
aaactcacgaagaagaagaagaaagacgacgtcaagaaggataaagaatcgagtagcgag
tttagttccgactcggacacggaccccgagagcggcggcaataagaaatcgaagaagaat
aagaatgagaagaatagtgataagaacggagcggctagctcgtcggcgccgggcagcgct
agcacgtcgcgcgcgggcacgccgccgtccgcggcggcggcggccgtggcggccgccgcc
gccgccgcgcaccccgccaagcgcgcccggctcgaccccagctatatcaacgaatgcggg
gtgacagaggaggcggtgcggcggtacctcgccaggaaaccaatgacgaccacggaacta
ttgaccaagttcaaatctaagcgtacaggggtgcgcagcgaacggttggtggaaactatg
acccaaatattgaagagaatcaacccggtcaaacagaacatcaatgggaagatgtatttg
agtataaaacagtcgtga

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