Amyelois transitella (navel orangeworm): 106137528
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Entry
106137528 CDS
T09957
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106137528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106137528
03012 Translation factors [BR:
atra03012
]
106137528
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106137528
Translation factors [BR:
atra03012
]
Eukaryotic type
Release factors
106137528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
106137528
NCBI-ProteinID:
XP_013193827
LinkDB
All DBs
Position
31:join(1962047..1962129,1964140..1964315,1964823..1965061,1965563..1965793,1965977..1966132,1966398..1966498,1967325..1967418,1968001..1968148,1979504..1979589)
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AA seq
437 aa
AA seq
DB search
MSEESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASN
IKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPIN
TSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKVAEVATQLFISADRPNVAGLILAGSADFKTELSQSDM
FDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKY
CFGVDDTLRALELGAVETLICWENLDIQRYVLKSHATNQETILHLTPEQEKDKSHFTDKE
SGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGLLRYKVDFQS
MQLDDEEIDNLYDVDDY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggaatcgtcagcagatcggaatgtcgaaatatggaagatcaagaaactcatc
aagagtttagagatggcaagagggaacggcacatcaatgatatccctgatcataccgccc
aaggaccagatatcccgggtgtccaaaatgttggccgatgagtttggcacagcctccaac
atcaagtcccgggtcaacaggctgtccgtgctcggtgccatcacgtctgtacagcacaga
ctaaaactgtatactaaagtccctccaaacggcctggtaatatactgcggcaccatagtc
accgaggagggcaaggagaagaaggtgaacattgacttcgagccgttcaagcccatcaac
acctcgctgtacttgtgcgacaataagttccacactgaggccctgaccgccctgttggcc
gatgacaacaagtttggtttcattgtcatggacggtaacggagccctgtttggtacgctt
caggggaacactagagaggtgctccacaaattcaccgttgacctgccgaagaagcacggt
cgcggtggtcaatcagcgttgcgtttcgcccgtctccgcatggagaagagacataattac
gtgaggaaggtggccgaggtggccacgcagttgttcatcagcgctgacaggcccaacgtg
gccggcctcatcctggcaggttccgctgacttcaagacggagctctctcagtccgacatg
tttgatccgcgtctccaagccaagatcatcaagctggtggacgtctcgtacggtggtgag
aacggtttcaaccaggccatagagttggcagccgagtcgctgcagaacgttaaatttatt
caagagaagaaactgattgggcggtactttgatgagatatcacaggacacggggaagtac
tgcttcggcgtggacgacactctccgcgcgctggaactgggcgccgtggagacgctgatc
tgctgggagaacctggacatccagagatatgtactgaaatcgcacgccaccaaccaagag
acgatcctccacctgacccctgaacaagagaaggacaagtcacactttaccgataaagag
agcggagtggaactcgagctggtcgaatgccaaccgcttttggagtggctcgcgaacaac
tacaagtccttcggagccaccctcgagatcatcacggacaagagccaggagggcagccag
tttgtcagggggttcggtggcattgggggccttctccgatacaaagtggacttccaatcc
atgcagctggacgacgaggagatcgacaatttgtacgacgtcgacgactattag
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integrated database retrieval system
