Amyelois transitella (navel orangeworm): 106137585
Help
Entry
106137585 CDS
T09957
Name
(RefSeq) gastrulation defective protein 1 homolog
KO
K24752
WD repeat-containing protein 70
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atra04121
]
106137585
03036 Chromosome and associated proteins [BR:
atra03036
]
106137585
03400 DNA repair and recombination proteins [BR:
atra03400
]
106137585
Ubiquitin system [BR:
atra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106137585
Chromosome and associated proteins [BR:
atra03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
106137585
DNA repair and recombination proteins [BR:
atra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
106137585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
DSE1_N
Beta-prop_pof12
Beta-prop_WDR75_2nd
WDR90_beta-prop_4th
ASA1
WD40_RFWD3
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
106137585
NCBI-ProteinID:
XP_013193892
LinkDB
All DBs
Position
24:join(6465010..6465582,6465795..6465906,6466552..6466747,6467185..6468310)
Genome browser
AA seq
668 aa
AA seq
DB search
MSKKPISFGKINFSLSKNQSVDSENEQSTSGFGSFGRTPIQDHKEIEELSDDLENQHVHQ
VMGIKNFGKKAKNFDIAEMMEQAKKTASEVNKRKLETDLAEKTAENNEEEAEDVIGPLPP
VLKDTHSQESGENDSEDDLIGPPLPPSIIQDDSKEKKEKVKNSDGEDSYDELSGSDDEDL
SLEKRIPNTHEVEMIHGTKAVVALAADPSGARLATGSIDYDVSFWDFAGMDSSMRSFRTL
QPCENHPIKALQYSATGDSILVVSGSAQAKVLDRDGFEVLECVKGDQYITDMARTKGHTA
SLNSGCWHPHIREEFMTCSQDGTLRLWLTENPKQHKAVIKPRQQGGLKTNPTTCAFSRDG
NTVACGCYDGSIQMWDHRKNFVNTTQVLRDAHQKQSEISSIQYSYLGTYLSSRGNDDTLK
LWDLRCFKKPLNVFGNLFSRYEQTDCGFSPDDTMVFTGESLQRGQDVGRLLFYNTKTFEL
VTCIDVTKSHVVKAVWHAKLNQIFVGCGNGVVKCYYNQRRSLRGAKLCLIKTHRKKHSME
VVSSQQIITPHALPLFRQEKLRTNKKRMEKDRLDPVKSRRPDLPITSGQGGRVAASGSTL
SSFVIRNLGLSKRVDDDQDPREAILKYAKEAEENPFWVAPAYKKTQPKTIFQSDGDEDGP
SDAKKPKT
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaagcctatatcatttggcaagatcaatttcagcctgagcaagaatcaaagt
gtcgattccgaaaatgaacaatccacatctggtttcggttctttcgggcgcactcctatc
caagatcataaagaaattgaagaattatccgatgaccttgaaaaccaacatgtgcaccag
gttatgggtataaagaactttgggaagaaggctaaaaacttcgatattgcagagatgatg
gagcaggcgaaaaaaacggcctccgaggtgaataaacgcaaattggaaacagatttagca
gaaaaaaccgctgagaataatgaagaagaggcagaagacgtcattggaccattgcctcca
gttttaaaagacacgcatagtcaggaatcaggagaaaatgattctgaagatgatctgatt
ggtcccccattaccaccaagtataatacaagatgattcaaaggaaaagaaggaaaaagtg
aagaacagtgatggggaagatagttatgatgagcttagtggatctgatgatgaagatttg
agtttggagaaacgaataccaaatacacatgaagtagaaatgattcacggtacaaaggca
gtggtagcattagctgcggatccttcaggcgcccgacttgccaccggatctatcgattat
gatgtctcattctgggattttgcaggcatggactcctcgatgcgatcattccgcaccctg
cagccctgcgaaaatcaccctatcaaagccctacagtactcggccacaggagattccata
ttggtcgtaagcggctccgctcaggccaaagttcttgacagagacggtttcgaagtcctc
gagtgtgtgaaaggtgaccagtacataaccgatatggctaggacgaaaggccacacggct
tccctcaacagtggctgctggcaccctcacatccgggaagagttcatgacgtgttcccaa
gacggaactctccgtctctggctgacggagaaccctaaacagcacaaggcggtcatcaag
ccgcggcagcaaggcggattgaagacaaaccctacaacttgcgctttctcgagagatggc
aacaccgtcgcgtgcggctgctacgacggctccatccaaatgtgggatcacagaaagaac
ttcgtaaacacaacccaagttctaagagatgcgcatcaaaagcaatcggaaatttccagt
atacaatattcgtatttaggaacgtacttatcgagcagaggtaacgatgatacgttgaaa
ctatgggacttgagatgcttcaagaaaccgttgaatgtctttggcaatctgttctcgaga
tatgaacaaactgactgcggattcagcccggatgacactatggttttcaccggagagtct
ctacaaagaggtcaggacgttggcaggctgctgttctacaatactaaaacgtttgagttg
gtgacgtgtatagatgtgacaaagtcacacgtggtcaaagcggtttggcatgcaaagttg
aatcaaatattcgttggttgtggcaacggtgtagtgaagtgttattataatcagagacgc
agtttgcgcggtgctaaattgtgtttaatcaagacacataggaagaagcattccatggag
gttgtcagttcacagcagatcataactcctcacgcgttgccattgttcaggcaggagaag
ttgaggacgaataagaagcgaatggaaaaggatagattagacccggtgaagtctagaaga
ccagatcttcctataacctcggggcaagggggtcgcgtggctgcctctgggagtacactg
agttcgttcgtgatccgtaacttgggtttgagcaagcgggttgatgatgatcaagatcca
agggaggctatattgaagtatgcgaaggaggctgaggagaacccgttctgggtggcaccg
gcgtataagaaaacacagcctaaaacgatttttcagtcggacggcgatgaagacggtccg
tctgatgcgaaaaaaccaaaaacttag
DBGET
integrated database retrieval system
