KEGG   Amyelois transitella (navel orangeworm): 106137648
Entry
106137648         CDS       T09957                                 
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106137648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106137648
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106137648
SSDB
Motif
Pfam: Ndc1_Nup Sec3_CC DASH_Dad3
Other DBs
NCBI-GeneID: 106137648
NCBI-ProteinID: XP_013193962
LinkDB
Position
10:5748372..5750060
AA seq 562 aa
METKSEIFSQRLIIAVLWNIGLQTFIAVLLVFLIQIDILHPLSWIASTLTDIFGWKMGLN
IILLGLVSFFHAYIYGNYYTIPVPKYFTRFSLFLNLFSVQNVTFSILYALSGYFTMSLYS
SLAKSNFNTLKKKCEHFDGQCLMEQSLYLQFGGMWMGLYYFLNTHILSPTLLLFPHIYQD
KFQQIKLAVSNILSTGFRNSILPVVYYCIFYYIWGSKPRTVVSDVYGAYLEDPPLDNLYN
LFTSGIWIGLWFYTSLFLISVYTMRTVFNIVLTEPMKFPIESDSSLTLHNALAQRSQFNG
YLGAQDLRILAMTDPARRHNIFTLSQPGGHPRNWNNLLEQCLNIINDFSKELDNINGDGK
KIEINNSDQKKLMNISPKSGLYSSKLRNLAESPKLIELKDYNRNKVENTFANAVKEELNI
FVNKLCQKPGIHYFFGELTDTKLKYLLLHAQPVMWTCEGLAFIASASLTEDKYGVVQNDL
PAIMSALVNLKQNLDKLSKPGLVPRKHILHDLLAIKIKSALVSAVKRSIYKIVITFSKYI
HEIPLDPDVQTAIQPFLMCKEA
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggagaccaaaagtgaaattttttcacaaagattaattatagcagtgttgtggaatatt
ggactacagacttttatcgctgtactattggtatttctaatacaaattgacatactacat
cccctatcatggattgcttctacactcaccgacatttttgggtggaaaatgggtctgaat
ataattcttcttggtttagtgtcttttttccatgcttatatttatggtaattactatacg
attccagtgccgaaatactttacgaggttttcattgtttctgaatttattttctgtacaa
aatgtaacatttagtattctctatgcattgagtggatattttacaatgagtttgtattca
tctttggctaaaagcaactttaatacactaaagaaaaaatgtgaacattttgatgggcag
tgtctcatggaacaaagtttgtatctgcaatttggcggaatgtggatgggtttgtactac
ttcttaaatactcatattttaagccctacacttctcttgtttcctcacatttatcaggac
aagtttcaacaaatcaaactggctgtgagtaatatactttctacaggatttaggaattct
atcctccctgttgtttattattgtattttttactatatatgggggagtaaaccaagaact
gtggtatcagatgtatatggtgcatatttagaagatcctccattagataatttgtacaac
ttattcacatctggtatttggattggactttggttctatactagtttattcttaatatct
gtgtatactatgagaacggtattcaatattgtgctcaccgaaccaatgaaatttcctata
gaatcagattcaagtctaacattacataatgcattagctcaaagatcacaattcaatggt
tatttgggagcacaggacttgagaatcttagccatgactgatcctgctagaagacataat
attttcacattgtcgcaacctggaggtcatccaagaaactggaataatttattagaacaa
tgcctgaatatcataaatgatttcagcaaagaattggataatattaatggagatggaaag
aaaatagaaattaataattctgatcaaaaaaagttgatgaatataagtcctaaaagtggc
ttgtattcaagtaaattaaggaatttggcagagtcaccaaagttgattgaactcaaagat
tacaataggaacaaagttgaaaacacatttgcaaacgcagtgaaggaagaactgaacata
tttgtgaacaaattatgccaaaaaccaggtattcactatttttttggagagttgacagat
acaaagctgaaatatttgttgttgcatgctcagcctgtaatgtggacttgtgaagggttg
gccttcattgcatcagcttcattgacagaggacaaatatggagtagtccagaatgacttg
cctgccatcatgtctgcactggtgaatctcaaacagaacttggacaagctgagcaaaccg
ggcctggtgcccagaaagcatattttgcacgacttgcttgcaataaaaataaagagtgcc
ctcgtatcagcagtcaaaagaagtatctataaaatagtaataactttttcaaagtatatt
catgaaatacctctggatccagatgttcaaactgccattcaaccatttttaatgtgtaaa
gaggcttaa

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