KEGG   Amyelois transitella (navel orangeworm): 106137680
Entry
106137680         CDS       T09957                                 
Name
(RefSeq) eukaryotic translation initiation factor 4B isoform X1
  KO
K03258  translation initiation factor 4B
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:atra00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    106137680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106137680
   03012 Translation factors [BR:atra03012]
    106137680
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     106137680
   mRNA cycle factors
    Stress granule specific factors
     106137680
Translation factors [BR:atra03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    106137680
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 106137680
NCBI-ProteinID: XP_013194011
LinkDB
Position
10:join(3009990..3010011,3010188..3010298,3010827..3011017,3012075..3012182,3012648..3012736,3013471..3013607,3014935..3015046,3016495..3016590,3016921..3016988,3018219..3018384,3019722..3019806,3020057..3020096,3020349..3020479,3020846..3021148,3021485..3021550)
AA seq 574 aa
MFNQFHRGKKSKKSKWIKASITDIIAEPTTIPTINNWADSVDEEPETFGFASRPRAPVVL
PSASRAARGGLAVDDESIPRRPPFIAHISNLPYDVDETAITELFDGLKITNLRLPREGDR
LKGYGYVDFEDRESLINAMNMPDLTIGGRRIRIDVATQDNDRRMGRGGRSDRDREYDPER
TMGDWRSGPRSAPEPARAAAPRVMDRDGMRERGAERERDSSADNRPGGWRDGERAAPEPA
RTPYGGRDSFGRDRDDRSRGFGRDGERERSGYGGRDGFRTAERDGGGFSREGRGFGSRGF
GDRDRDPPPREDAKPRERPKLNLLPRTVPREPEAAAPVEERPERPAAKPVPAEKVFGAAK
PVDTAAKEREIEERLRKQEEEARRATEEKERWGRRNDHSGDRRGGARRDDRGRDSRSYNR
DRRDYSKDDKDRRDYRDDRERRDYSKESRDDKDRRDYRDDRERRSSDDRGSVDRRGSRDR
RRSPDRRGSPDRRVSPDRRGSRDRRVSPERRPRSPAAEEERPTERNGRARQSRSREREPE
EKPLPKLKEQEKPNFVASNKFSFLEDADDDGGSD
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgttcaaccaatttcatagaggcaagaaatcaaagaaatcaaaatggatcaaagcaagt
atcacagacattatagcagaaccgaccactattcccacaataaacaattgggcggattcc
gtagatgaagaaccagagacatttgggttcgcgtcgcgaccaagggcgccggtggtgctc
ccgtccgcttcgcgagctgcccgcggagggctggccgttgatgatgagtccattcctcga
cgaccacccttcattgcacacatttcaaacctgccgtacgatgttgatgaaacagctatc
acagagctgtttgatggccttaagattaccaacctgagattgccgcgggaaggcgatcgc
ctcaaaggatatggatatgttgacttcgaagacagggaaagtcttatcaatgccatgaat
atgccagatttgacaataggcggcagaagaatacggatagatgtagctacgcaggataac
gaccggcgcatgggcagggggggtcgctccgaccgagacagggagtacgacccggagcgc
acgatgggcgactggcgctcgggcccgcgctcggcgcccgagccggcgcgcgccgccgcg
ccgcgcgtcatggaccgcgacggcatgcgcgagcgcggcgccgagcgggagcgcgactcg
agtgcagacaaccggccgggcggctggcgcgacggcgagcgcgccgcgcccgagcccgcg
cgcacgccgtacggcggccgggactcgttcggccgggaccgagacgaccgcagccgagga
tttggccgcgatggcgagcgtgaaaggagtggttatggcggtcgagatggattccgcact
gctgaaagagatggtggtggctttagccgggaaggcagaggatttggttctcgcgggttc
ggtgatcgtgaccgtgaccctccacccagagaagacgcgaagccccgcgagcggccgaag
ctgaacctgttgccgcgcaccgtgccgcgcgagcccgaggcggccgcgcccgtcgaggag
cgcccggagcggccggcggccaagcccgtgcccgccgagaaggtgttcggcgcggccaag
cctgtcgatactgctgcgaaggagcgtgaaattgaagaacgcctaaggaagcaagaagaa
gaagctagacgcgccacagaagaaaaagaacgttggggccgtaggaatgaccattccggt
gaccgtcgtggcggcgcgaggcgtgatgatcgcgggcgagactcgcgcagttacaacaga
gaccggcgtgattattccaaagatgataaagacaggcgcgactatcgcgacgatcgcgag
cggcgagactactccaaggagagccgggatgacaaggaccgccgcgactacagagacgat
cgcgagcgacgctcgtccgacgaccgcggatcagtggaccgccgcgggtcacgcgaccgc
cgccggtcacccgaccgccgcgggtcacccgaccgccgcgtgtcccccgaccggcgcggg
tcacgagaccgccgcgtgtcccccgagcggaggccgcggtctcccgccgcggaggaggag
cggccgaccgagaggaacggccgcgcgaggcagagccgctccagggagcgcgagcccgag
gagaaaccgctgcccaagctgaaggaacaggagaaaccgaacttcgtagcgtcgaataaa
tttagtttcctggaggacgcggacgacgacggcggctccgactaa

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