KEGG   Amyelois transitella (navel orangeworm): 106137692
Entry
106137692         CDS       T09957                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106137692
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106137692
   03041 Spliceosome [BR:atra03041]
    106137692
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     106137692
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     106137692
Spliceosome [BR:atra03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    106137692
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_3
Other DBs
NCBI-GeneID: 106137692
NCBI-ProteinID: XP_013194035
LinkDB
Position
10:join(3489832..3489861,3490355..3490578,3490929..3491173,3491530..3491682,3491976..3492188,3493211..3493305)
AA seq 319 aa
MKPSGGGDEYEEPEHMRKLFIGGLDYHTNDASLKEFYEQWGEIVDVVVMKDPQTKRSRGF
GFITYSRAHMVDDAQNNRPHKIDGRVVEPKRAVPREEINRPDASATVKKLFVGGLKQDVE
EDDLKEYFSSYGNIVSVTLVTEKETGKKRGFGFVEFDDYDPVDRICLQQNHKVRGNRLDV
KKAISKNEISGGGGGRRGGGRGGGGWGNRQSNQDWGNDGGYNSGYGQGGWSNHNPWDNAG
GSWGNQGYGDQSGWGQSSNNFGGSYQQGYSGGPMRGNYNASRAQPYNAGGGGGGGYSSNN
AGGGYNMGNATAGGNQRRF
NT seq 960 nt   +upstreamnt  +downstreamnt
atgaagccaagcggaggtggcgatgaatatgaggagcctgagcatatgcggaagcttttt
ataggaggccttgactatcacaccaatgatgcgtcattgaaagaattttatgagcaatgg
ggggaaattgtggatgtagtagttatgaaggatccgcagaccaaaaggtctagggggttt
ggatttattacatattcccgtgcacacatggttgatgatgctcaaaataatagacctcac
aaaattgatggaagggtggttgaaccgaagagggctgtgcccagagaggagataaaccgg
cctgatgccagcgctacagtgaagaaactgtttgttggaggcctcaaacaggatgttgaa
gaagatgatctgaaggagtatttcagctcttacgggaacattgtgtctgtaaccttagtg
actgagaaggagactggaaaaaagagaggctttggttttgtagagtttgatgactatgat
cctgtggataggatatgcttgcaacagaaccacaaggtgagagggaaccgtttggatgtg
aagaaggctatatcgaagaacgagatctcgggaggcggcggcgggaggcgcgggggcggg
cgcggcggcggcgggtggggcaaccggcagagcaaccaggactggggaaatgacggcggg
tacaattctggatatggtcaaggtggttggagcaatcacaacccttgggacaatgcggga
ggctcctgggggaaccagggctacggagaccagagtggatggggacagtcttcaaacaac
tttgggggaagctaccaacaagggtacagcggaggtcctatgcggggaaattataacgct
tcaagggcccagccttataatgcagggggcggtggtgggggagggtactccagcaacaac
gccggcggcggctacaacatgggcaacgccacggccgggggcaaccagcgcagattctag

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