Amyelois transitella (navel orangeworm): 106137693
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Entry
106137693 CDS
T09957
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K19613
leucine-rich repeat protein SHOC2
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
106137693
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_9
LRR_NLRC4
LRR_R13L1-DRL21
LRR_LRWD1
LRR_5
DHU1_N
Motif
Other DBs
NCBI-GeneID:
106137693
NCBI-ProteinID:
XP_060802155
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Position
10:complement(3599795..3601498)
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AA seq
567 aa
AA seq
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MNFDNSSRETPEALDTVGTVSPREKYHSMREKKLSTASLTNTEGARPKVVTVKHPESNKP
KPTAKKSKPIQADLDVIKEFMRCREEGVKRLDLSKSSITSLPPNVRDLTHLTEFYLYGNK
LVALPAEFGCLTNLQTLALNENSLTSLPESLANLQCLKVLDLRHNKLSDIPEVVYRLTSL
TTLFLRFNRIRVVGDGIASLTNLTMLSLRENKIKELSSGIGNLVNLVTFDVSHNHLEHLP
REIGNCINLSTLDLQHNELLDIPETIGNLQALTRLGLRYNRLTSIPPTLSNCKHMDEFNV
EGNSISQLPEGLLASLNALSSITLSRNSFMSYPSGGPAQFTNVFSINLEHNQIDKIPYGI
FSRAKNLTKLNMKENSLTSLPLDIGTWANMVELNLGTNQLTKLPDDIQCLQNLEILILSN
NLLKRVPPSIGSLRKLRILDLEENKLDVLPNEIGFLHDLQKLIVQSNQLTTLPRSIGHLT
NLTFLSVGENNLQYLPEEIGTLENLESLYLNDNLNLTNLPFELALCVSLQIMSIENCPLT
AIPPEVVSSGPSLVIQYLKSQGPYRAM
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgataattcgtcgagagaaacccctgaagcattagatacagtcggaactgta
agccctcgtgaaaaatatcacagtatgcgggaaaagaaattgtctactgcttcacttaca
aataccgaaggcgcacgccccaaggtggtgaccgtcaagcacccagagtccaataagccc
aaacctaccgcgaagaaaagcaagcctattcaagcggatctcgatgtaatcaaagagttc
atgcgatgccgcgaagaaggcgtcaaacgacttgaccttagtaagtcatctataacatca
ctgccgccaaatgttcgagacttgacacatttaacagagttttatttgtatggtaataaa
ttggtagccctacctgcagagtttggctgcttaacaaacttacaaacattagctttgaat
gagaattcgttgacaagcttacctgaatcacttgcaaacttacaatgcctcaaagtcttg
gacttgagacacaacaagctcagcgatataccagaagttgtgtacaggctcacttctttg
actactttgttcttgagattcaacagaatcagagttgtgggtgatggcattgccagtctg
actaatctgacaatgcttagcctacgagaaaacaaaataaaagaattgtcttcaggaatt
ggaaatctagtaaacttggttacatttgatgtttcacataatcacttagaacatctgcct
cgggaaattggaaactgcatcaatttgtcaacattagacctacaacataatgaactcctt
gatattcctgagactattggaaacctacaagctttgactcgtctgggacttagatacaat
agactgaccagtataccaccaacattgagcaattgtaaacacatggacgagtttaacgtg
gaaggaaactctatctctcaattacctgaaggccttctagctagtttgaatgcactttca
agtatcactttgtcccgcaactcattcatgagttacccatcaggaggacctgctcagttt
actaatgtattttctatcaatcttgagcataatcagatagacaaaattccctatggcata
ttttcaagagcaaagaacctaacaaagctgaatatgaaagaaaactcgctgacatccctg
ccacttgatattggaacatgggcaaatatggtagaattaaacttgggcactaatcaacta
actaaattgcctgatgatatccaatgtctgcaaaatttagaaatattgatcctgtcaaac
aatctcctaaagagagtacccccaagtattggcagcctgaggaagctaagaattttagac
ttggaagagaataaattggatgtgttaccaaatgagataggatttctccatgacttacaa
aagttgattgttcaatccaaccaattaacaacattgcctcgctccattggccatttaact
aatctcacatttctgagtgtaggtgaaaataatcttcaatatttgcctgaagaaataggt
acacttgagaatttggaatcattgtatttgaatgataacctaaatctgacaaatcttcca
tttgaattagctctttgtgtcagtttgcaaattatgagcattgagaactgtccactgaca
gctattccaccagaggtggtgtcttcggggccgtcgttggttattcaatatttgaagtct
caaggcccttacagggctatgtga
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