KEGG   Amyelois transitella (navel orangeworm): 106137732
Entry
106137732         CDS       T09957                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106137732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106137732
   03036 Chromosome and associated proteins [BR:atra03036]
    106137732
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     106137732
   Coactivators
    SAGA/TFTC/STAGA complex
     106137732
Chromosome and associated proteins [BR:atra03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     106137732
    STAGA complex
     106137732
    TFTC complex
     106137732
    SAGA complex
     106137732
    SLIK complex
     106137732
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 TFIID_NTD2 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin ANAPC4_WD40 NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_WDR41 WD40_RFWD3 Beta-prop_EIPR1 WD_LRWD1
Other DBs
NCBI-GeneID: 106137732
NCBI-ProteinID: XP_013194093
LinkDB
Position
10:join(5145252..5145329,5145421..5145575,5145652..5146026,5146520..5146667,5146885..5146957,5147242..5147380,5147863..5148042,5148304..5148456,5149054..5149201,5149788..5149956,5150640..5150871,5151381..5151492)
AA seq 653 aa
MSLIKKSRNDAIKAAVTSYLERRNYPDIDVFSNTHSTNQSAEQMAVATIVQCESSRTNSI
LFSCINNDFAQYDIQYSRLVNFIKEIKNEKVRNELLGLLSPLLCHLYLEMLRGGHSSAAQ
VFLKRHSATLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSLQNGTIDNETPEKDYMNQI
LDDIGSIYTLQEIESRPTIAAFRSSKYDVYLSQDALNMLKAYLAKHGHVLLIQVLQTWFH
IDVNSDANKKNSEDEEEQLEETNVSVNSEEKTTEIKDIFAKCNGHAEYQSVDKELRDLQD
AIKGVRESLAPLKLYKISAPDTHLICAKTDTNCNILCGGFSNSEIRLWDLGQNNVKKRVN
RNISEIELACYMPVEPAAEDNTLQIGAGLPLRGHSGPIQAVNVLWKEELILSASHDSTMR
AWKLGDYSCASIYRGHNYPIWCMDVSKNGLYIVTGSHDKTAKLWSLDRTFPIRVFVGHTS
DVTCVKFHPNEAYIATGGADRSVRLWTVCAARLVRVLCGHRDVLRALAFAPSGNYLASAG
DDKKIKVWDLAACTCIHEHRGHHGKVTSLDWSAVGKPSLTNRVVADPGDLSIENSLLCST
GMDGIVKVMWENQTKNKPISSQDVQSATYNTKCSYLVDVQVQPDWVLAIGTKR
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgtctcttattaagaaatctagaaatgatgccattaaagcagcagttacatcatatttg
gaacgaagaaactatcctgacatagatgtgttcagtaacacccactcaacaaaccaaagc
gctgaacaaatggcggtggctactattgttcaatgtgaatcaagtcgcactaattctatc
ctattttcatgcatcaacaatgattttgcccaatacgacatacagtattcaaggttagtg
aacttcattaaggaaataaaaaatgagaaagtaagaaatgaactattgggattattaagt
ccattactctgtcacttgtacctggaaatgttacgaggtggacacagcagtgctgctcaa
gtatttcttaagcggcactctgcaactttgcctcaaaaagatttgtcttaccatcaacct
atagatgggaatctgccatcagcattatatcgccctaacagcttggaacaactgtttaat
tctcttcaaaatggtactatagacaatgaaactccagagaaggactacatgaatcaaata
ttggatgatattggctctatatatactctgcaagaaattgaatctcggccaactattgct
gcttttaggtctagcaaatatgatgtttacttgtcccaagatgcactgaatatgttgaaa
gcatacctggcaaagcatggacatgttcttctgatacaagtgcttcaaacttggttccat
attgatgtgaacagtgatgctaacaagaaaaattctgaagatgaagaagagcaattggag
gaaactaatgtctcagtaaactcagaagaaaagacaacagaaataaaagatatttttgct
aaatgtaatggacatgctgaatatcaaagtgtggacaaggagttgagggatttacaagat
gcgataaaaggagtcagagaatcattagcaccacttaaactgtacaaaatatcagcaccg
gacacacacttaatttgcgcaaagactgatacaaactgcaatatactgtgtggaggcttc
agcaactcagagattagactttgggatctcggtcagaacaatgtgaaaaagagagtgaat
cggaatatatctgaaatcgagctggcctgctacatgcctgtggagcctgcagctgaagac
aataccctacaaattggcgcaggcctaccactcaggggtcactcgggtccaatacaagct
gtcaacgttttgtggaaagaagaattgatactctctgcttcgcacgatagcacgatgaga
gcgtggaaactcggcgattactcttgcgcgtccatttacagaggtcacaattatccgatt
tggtgcatggatgtgtcaaaaaatggcctatatattgtgacgggatctcacgacaagact
gccaagctatggtcgctggatcgcacattcccgatccgagtgtttgttggtcacacttct
gatgttacttgcgtgaagttccacccgaacgaggcgtacatagcgacgggcggcgcggac
cgctcggtgcgcctgtggacggtgtgcgcggcgcgcctcgtgcgcgtgctgtgcggccac
cgcgacgtgctgcgcgcgctcgccttcgcgccgtccggcaactacctcgccagcgccgga
gatgacaagaagattaaagtatgggacttggccgcatgtacatgcatacatgaacacagg
gggcaccatgggaaggtgacatctttggactggtccgcagtcggcaagcccagcctcacg
aacagagtggtagcagatccaggagacctgtccattgagaactctttactatgctccact
ggcatggatggcatagtaaaagtcatgtgggaaaatcaaactaagaataaaccaatctcc
agccaagatgttcagtctgccacatacaacacaaagtgctcctacttagttgatgtacaa
gtgcagccagattgggtattagctataggaactaaaagataa

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