KEGG   Amyelois transitella (navel orangeworm): 106137819
Entry
106137819         CDS       T09957                                 
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106137819
   03036 Chromosome and associated proteins [BR:atra03036]
    106137819
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     106137819
Chromosome and associated proteins [BR:atra03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     106137819
    SLIK complex
     106137819
SSDB
Motif
Pfam: SNF2-rel_dom HTH_Hrp3 CDH1_2_SANT_HL1 Helicase_C CHD1-like_C Chromo ResIII HDA2-3 DEAD
Other DBs
NCBI-GeneID: 106137819
NCBI-ProteinID: XP_013194187
LinkDB
Position
3:join(7786539..7786547,7787425..7787513,7787597..7787932,7788218..7788394,7789247..7789428,7789582..7789911,7790027..7790277,7791254..7791367,7791662..7791826,7791936..7792216,7792325..7792682,7792767..7793141,7793227..7793475,7793686..7793853,7794149..7794269,7795049..7795227,7796078..7796249,7796574..7796736,7796989..7797355,7797466..7797681,7797965..7798270,7798377..7798600,7798780..7799118,7799774..7799981)
AA seq 1792 aa
MLLKGFINESGSESTSEKGEKSDSSGSGSGSESESGSSSSGSGSEKSSVGDRSHHSDDDT
KLSPKHSNPNSSKSDKDSSGNDSPSKSHSRNSHGRVKSDLWEDNPDIYGIRRSARSRKEP
DRLKLADSDSSERGRSHSRKNRKRSNSWNSDSSDSDSDLKGSPPPPSKRPGQRSVPLRKK
KPARRRFTSEEDESTEGSDEEAKSRTATRRTGAAVSYKEASDEQTDSSDLLEVEGEGEAE
GEPEPEEHSETIERVLGFRRGKKGVTGNVTTVYYIEENGDPNEGCDPNDEESTEPQYLIK
WKGWSHIHNTWESEASLNEQKVKGLKKLENYIKKEAELSWWRQQAGPEDIDYFECQAELQ
QELVKTYNNVERIIAEQTRELESGGTAHEYFCKWESLPYADATWEDSSLIERRWPVEVEN
FKYREAAKTTPSRHCPVLRRRPKFHQVKEQPDYMGKDQTYTLRDYQMDGLNWLIHSWCKD
NSVILADEMGLGKTIQTICFLYYLFKTQQLYGPFLCVVPLSTMTAWQREFQQWAPDINVV
TYIGDVISRDIIRQFEWSFSSSKRLKFNAILTTYEILLKDRQFLRSFSWACLLVDEAHRL
KNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFIMPYKFESWEEFEKDHEDAA
TKGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYSALRK
GVKGSINTFINIVIELKKCCNHALLTKPEDFESRASLATTDAVEKLLRGSGKLLLLDKLL
CRLKETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGEIRKQALDHFNAEGSQD
FCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARS
VEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNKRDGATTANNPFNKEDLNAILKFGAEEL
FKDDDENDEDPVCDIDEILQRAETRDEAPTMAGDELLSAFKVASFAFDEEKAVMEVKKDS
AEEETKDWDDIIPENVRNTIAEQEKNKEMEDLYLPPRRKNLQQNNADEKGGRSRRGRSSG
DGAEGAGEDGDADSDASYEVSADDERPRKRGRPPASHREKIKGFTDQEIRRFVKSYKKFS
APSKHLDSIACDAELQEKPLAELKKLGEMLEERCKAVLNDTSEPANEPGEGKKNARKTFK
LGGVPVNAKTMAACLEELAPLDVFLPDTKEERLKWQLEFMTRPANFDCEWGVADDSKLLA
GIYQYGMGSWEAIKMDSSFEIGDKILTNEDKKPQAKHLQSRAEYLLKVIKKLLDQKNGKQ
KQKKPRMKRGLKEPVTKDIVEDDGSSADEKKGKTVKNDKSDKGKLKMEEVSTHDETSNDK
KDRDKKRLRKDGNRPKVEKVKGRKKPAGPMHFTANNEPRALEVLGDLHPSVFEECKEKMR
PVKKALRALDNPDQTLSESEQVTRTRTCLAQIGNQIDICLEAYPDPEKKVEWRSNLWYFV
SKFTNFDAKQLYKLYKYGLKKTEGKPKDGKHKENVKANNKNNHNSNNHVKSNKRDLKNDD
ANDKKEKRLKVEKREKLDKSNDKTPHTSGVKRKLEEGECDPESNENKRHERHKHKHKDRK
DRDRSLKRDDLMYRERRPERERDRERERERGRERERERGRERERDRSRTRRDSGGGGPAR
ARPPYAPHAEHAAHAAWTAPAYPGPRQDPRYRADRNPRPHDKRRYGGSGFGGIAGPYGGY
YDGATMPSAMGFPPVRPYQDDWRGYPADYSYEERDYEREVYRRDYDRRAPPT
NT seq 5379 nt   +upstreamnt  +downstreamnt
atgcttttgaaaggattcataaatgaatctggcagtgaatctacaagtgagaaaggagaa
aagagtgattccagtggctccggttctggcagtgaaagcgaaagtggatctagctcctcc
ggatcagggtctgaaaaatcttcagttggtgacaggtcgcaccatagtgatgatgatacc
aaattgtcaccgaaacacagcaatcctaattcttctaaatcagataaagacagttctggt
aatgattcaccatcaaaatctcactcaagaaatagccatggaagagtcaaatcagatctt
tgggaagacaatccagacatttatggtatcagaagatctgcccggtcacgaaaagaacct
gatagactcaaactagcagacagtgattctagtgagaggggtagaagtcacagtagaaaa
aacagaaaaagaagcaattcttggaattctgattcatcagatagtgatagtgacctaaag
gggtcaccacccccaccttcaaagagacctggccaaagaagtgtacctctgagaaaaaag
aaaccagcccgaagaagatttacaagtgaagaagatgaaagtactgaaggctctgatgag
gaggcaaaaagtcgaacagctacaagacgcactggtgctgcagttagttataaggaagca
agtgatgaacaaactgattcttcggatcttctggaggtggaaggcgaaggagaagctgaa
ggggagccagaaccagaagagcacagtgaaactatagagagagttcttggctttagacgc
ggaaagaaaggagtcactggcaatgtgacaacagtgtattatatagaagaaaatggcgac
ccaaatgaaggatgtgaccctaacgatgaagaatcaactgaaccacagtacctgatcaaa
tggaaaggatggtctcatatccacaacacatgggaatctgaagcatcacttaatgaacaa
aaagttaaaggccttaaaaaactagaaaattatattaagaaagaagctgaactttcatgg
tggagacaacaagctggtccagaggatatagattattttgaatgccaagctgaactacaa
caagaattagtgaagacttacaacaatgtagagagaataatagcggaacaaacaagagaa
ctagaatctggtggaactgcacatgagtacttttgcaaatgggagtctcttccatatgca
gacgcaacttgggaagattctagcctcatagaaaggagatggcctgtggaagtggagaat
ttcaaatacagggaggctgccaagactactccttcaaggcattgccctgtcttaagaaga
cgccccaagtttcatcaagtaaaagagcagcccgactatatgggcaaagatcagacatac
acattgagagattaccaaatggacgggctaaattggttgatacattcctggtgtaaggac
aactctgtcattcttgctgatgaaatgggtttaggtaaaactatacagaccatatgtttc
ttgtactacctcttcaaaactcaacagttgtatggcccatttctatgtgtagtgccacta
agtacgatgacggcgtggcagcgagaatttcaacaatgggcgcctgatattaacgtagtc
acatacattggtgatgtcattagcagagacattattagacaatttgaatggagcttttca
agttctaaaaggctaaaatttaatgcaattttaacgacatacgaaattctactcaaagat
agacaatttttgagatcattcagttgggcgtgcctacttgttgatgaagctcataggtta
aaaaacgatgattcgttattgtataaagctttaaaggaatttgacaccaatcaccgccta
ctagtcactggcactccgttacaaaattcgctcaaagagttatgggctcttttacacttt
attatgccttacaaatttgaatcatgggaagagtttgagaaagaccatgaagatgctgca
accaaaggttacgaaaagttacataaacaattagaaccttttattttgcggcggcagaaa
aaagacgtagaaaaatcattaccggctaaagtagaacaaatattgagggtggaaatgaca
tcgattcaaaaacaatactataaatggatcctcacgaagaattacagtgccttgcggaaa
ggagtcaaaggatcaataaatacgtttataaacattgtcattgaattgaaaaagtgttgt
aatcatgcacttctgactaaacctgaagatttcgaatctagagcgtctcttgccacaaca
gatgctgtcgagaaacttctgagaggatcaggaaagttactattattagacaaacttctc
tgcaggctaaaagagaccggccacagagtacttatcttctcgcaaatggtcaggatgttg
gacatattggctgaatacttacaacggcgacattttcctttccaacgtcttgatggaagt
ataaaaggagaaataagaaagcaggcccttgatcatttcaatgcggaaggctctcaagat
ttctgcttcttgctgtcgacccgcgctggtggattgggtatcaatttggcgacggccgat
actgtaattattttcgactctgattggaaccctcaaaacgatttgcaagctcaggctcga
gcgcataggattgggcaaaaaaatcaggtcaacatttatagattagtaacggctcgatct
gtagaagaagacattgtagaaagagccaaacggaagatggttttagaccatcttgtcatt
caacggatggatacaactggcaggactgttctcaacaagagggacggcgctactactgcc
aataatccgtttaacaaggaggatttgaatgctattctaaagtttggtgctgaggaattg
ttcaaagatgatgatgagaatgatgaggaccctgtctgtgatattgatgaaatcctacaa
cgggcggaaacgcgagacgaagccccgacaatggctggcgacgaattgttgtccgcgttc
aaggtcgccagtttcgctttcgatgaagagaaagctgtcatggaagttaagaaagactct
gcggaagaggagactaaagattgggatgacatcatacccgagaacgtccgaaataccatt
gcagagcaagagaaaaataaagaaatggaagatttgtacttaccaccgagaagaaaaaat
ttacagcagaacaatgctgatgagaaaggcggtagatcgcggcgcggacgcagctcgggc
gacggcgcggagggcgcgggcgaggacggcgacgccgacagcgacgcctcgtacgaggtg
agcgccgacgacgagcggcccaggaagcgcggccgcccgcccgcctcgcacagggagaag
atcaaaggattcactgatcaagagataaggcggttcgtgaaaagctataagaaattctcc
gcaccgtcgaaacatctggacagcatagcctgcgatgcggagctgcaggagaaacctctg
gctgaacttaagaaattgggggagatgctggaggaaagatgtaaagcggtgctgaatgat
acgtcagaaccagccaatgaaccaggagaaggcaagaaaaatgctaggaaaacatttaaa
cttggtggtgtaccagtaaatgctaagactatggcggcttgtttagaagaattagcacct
ttagatgtatttttgccagatacaaaagaagaaagattaaaatggcagttagaatttatg
acgaggcctgctaattttgattgtgaatggggagttgcggatgattccaaactacttgca
ggcatataccagtatgggatgggctcgtgggaggcgataaaaatggattcctcatttgaa
ataggagataaaatattaactaatgaagacaagaaacctcaagctaaacatctacagtcg
cgcgcagagtatttattaaaagtgataaagaaattattagaccagaaaaatggtaaacaa
aaacagaaaaagccgcgaatgaaaagaggactcaaagagcctgtcacaaaagatattgtg
gaagatgatgggagttcagcagacgagaaaaaaggaaagactgtcaaaaatgataaatct
gataagggtaaattaaaaatggaagaagtgtcgacgcatgatgaaacttctaatgataag
aaagacagagataagaaacgcctaagaaaggacggtaatcgtccgaaagtagaaaaagtg
aaggggaggaagaaacctgcggggcctatgcatttcactgccaataacgagccgagggcc
ttggaggtgctcggggaccttcatccttcagtgtttgaagaatgcaaagaaaagatgcga
cctgtgaagaaagctctaagagctctcgataatccagatcaaacattgtctgagtcagaa
caagtcaccagaacacgaacatgcctagcacaaattggaaaccaaatagatatatgcctg
gaggcttatccagatccagagaagaaagttgagtggagaagtaatctctggtattttgta
tcaaaatttacaaattttgatgcaaaacaattgtacaaattatataagtatggccttaaa
aaaactgagggtaaaccgaaagacggaaaacataaagaaaatgtaaaggcgaataataag
aataatcacaattcaaacaatcatgttaaatcaaataaaagggatttgaaaaatgatgat
gcaaatgacaagaaagagaagagattaaaagttgaaaaaagggagaagttagataaatcc
aatgataaaacaccacacacgtcaggagttaaaagaaaattagaagaaggagaatgcgac
ccagaatccaatgagaacaaacgacatgaaagacataaacacaagcacaaggatcgcaag
gatagagataggagcctgaagcgggacgatttgatgtacagagagcggcggccggagcgc
gagcgggaccgggagcgggagcgggagcggggccgcgagcgagagcgggagcgcggccgc
gagcgggagcgggaccgctcgcgcacgcgccgcgacagtggcggcggcgggcccgcgcgc
gcgcgcccgccctacgcgccgcacgccgagcacgccgcgcacgccgcctggaccgcgccc
gcctaccccgggccccgccaggacccgcggtaccgcgccgaccgcaaccctaggccgcac
gataagagacggtacggcggcagcggctttggcggcatagccggaccttacggcggatac
tacgacggcgccacgatgcctagcgctatgggcttcccgcccgtgcgcccttaccaggat
gattggcggggctaccccgctgattactcatatgaagaacgggattatgagcgtgaggtt
tatagaagggactatgatcgccgcgcgcctcccacttaa

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