Amyelois transitella (navel orangeworm): 106138092
Help
Entry
106138092 CDS
T09957
Name
(RefSeq) protein pelota
KO
K06965
protein pelota
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106138092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106138092
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106138092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pelota_N
eRF1_2
eRF1_3
Svf1
Motif
Other DBs
NCBI-GeneID:
106138092
NCBI-ProteinID:
XP_013194594
LinkDB
All DBs
Position
5:join(4094206..4094246,4094343..4094586,4094805..4095059,4095364..4095586,4095739..4095931,4096357..4096463,4096921..4097015)
Genome browser
AA seq
385 aa
AA seq
DB search
MKLVFKNIEKDGCGSIGLIPEEPEDMWHAYNLIAEGDAVTASTVRKVQTESSTGSSTSNR
VRTTLTIRVENIDFDTQACMLRLKGRNIVENQYVKMGAYHTLDLELNRKFTLQKTLWDSV
ALERVDMACDPAANADVAAVVMQEGLAHVCLITPSMTLVRSKIDITIPRKRKGFVQQHEK
GLNKFYDAVMQGILRHVDFSIVKCVIIASPGFVKDQFFDYMMQQAIKTDNKLLMENKGKF
LLAKASSGFKHSLKEVLQDPAVISKISDTKASSEVKLLESFYTMLQLEPAKAFYGKKHVE
RANEAMAIETLMISDKLFRCQDVQQRKEYVALVDSVRENGGDVRIFSSMHVSGEQLDQLT
GIAAILRFPMPELEDSDAEDDSDSD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtttttaaaaacatcgagaaagatggctgtgggagtattgggcttattcct
gaagagccggaggatatgtggcacgcatacaacctcattgctgaaggtgatgcggtgacg
gcatcgacagtacgtaaagtacagacggaatcttccacaggatcttctacgagtaacaga
gtgagaactacactcacaatacgagtggaaaacatcgacttcgatacacaagcatgcatg
ttgcgactaaaaggccggaacattgtagaaaaccagtatgttaagatgggagcatatcac
actctggacttggaattgaatcgaaaatttactttgcaaaagacactatgggattcagta
gcattagaaagggtggacatggcgtgtgatccagctgctaatgctgatgttgccgctgtg
gtgatgcaagagggcctggcacacgtgtgtcttatcacaccctcaatgacattggttagg
tctaaaatagacatcacaataccaaggaaaaggaaggggtttgtacagcaacatgaaaag
ggtttgaacaaattctatgatgctgtaatgcaaggaatccttagacatgtagatttcagt
attgtaaaatgtgtgataatagcatctcctgggtttgtcaaagaccagttctttgattat
atgatgcagcaggccataaagacagataataaattgctaatggaaaataaaggaaagttc
ctgttggcaaaggcttcctcaggattcaagcattctttaaaagaggtccttcaagatcct
gcagtgatttccaaaatctccgacacaaaggcttctagtgaagtgaagttacttgaaagt
ttctacaccatgctccagctggagccggctaaagcattctatgggaagaaacatgttgaa
cgagccaatgaggccatggctatagagactcttatgatatctgataaacttttcaggtgc
caagatgtacagcaaagaaaagagtatgtggctctcgtggattcggtgcgagaaaatggt
ggtgatgttaggatattttccagtatgcatgtttctggcgaacaactggatcagcttact
ggaatagcagctattctcagattccccatgccagagcttgaggacagcgacgcagaagac
gacagtgattcagactaa
DBGET
integrated database retrieval system
