KEGG   Amyelois transitella (navel orangeworm): 106138314
Entry
106138314         CDS       T09957                                 
Name
(RefSeq) transcription elongation factor SPT6
  KO
K11292  transcription elongation factor SPT6
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106138314
   03036 Chromosome and associated proteins [BR:atra03036]
    106138314
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     106138314
Chromosome and associated proteins [BR:atra03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     106138314
SSDB
Motif
Pfam: SH2_2 HHH_7 YqgF HTH_44 SPT6_acidic S1 HHH_3 SH2 Spt6_S1 HHH_9 Tex_N S1_RRP5 Tex_central_region OB_RRP5_4th
Other DBs
NCBI-GeneID: 106138314
NCBI-ProteinID: XP_060803163
LinkDB
Position
13:join(3098634..3098672,3098787..3098880,3099083..3099282,3100148..3100267,3100775..3100935,3102349..3102482,3102697..3102812,3103205..3103377,3103777..3103930,3104609..3104751,3105303..3105437,3106020..3106174,3106531..3106652,3107199..3107383,3107689..3107854,3108082..3108224,3108695..3108789,3109191..3109371,3112041..3112227,3113024..3113956,3114282..3114529,3118550..3118754,3118873..3118969,3119159..3120105)
AA seq 1710 aa
MADFLESEAEESDVDSEEDEGPTERKKPKRKAAVQSDDEDEEEEDDEERLREELKDLIDD
APIEDSGSDGEDSDASAGPKKRKKSDDELDDRLEDEDYDLIEENLGVKVARNKFKRLRRL
EDDDSDNEGADDPELEREVIAEKLFVGGSDDEDENRSEPAPARGDVEYDDENEDMESDAD
DFIVDDDGRPIAERKKKRKPIFTDASLQEGQDIFGVDFDYDEFEKYGEEDYEDEDDEDLD
EYIEEEDEEGDRRRAKKGKAKRPSKKSIFEIYEPSELKRSHFTDLDNEIRKTDVPERMQI
REVPITPVEEGSTELADEAEWIYKQAFLKPPVSKADSQEARERSRRGSSTITKIRQALDF
MRNQTLEVPFIAFYRKEYVQPELNINDLWKVYKYDAKWCQLKQRKENLLKLLENMRDYQL
DKVMQNPDAPIPENMRLIRDEDIERLKSVQTPEELRDVHTHFLLYYSGDLPEMQKVQRAK
EKKKELEEKKKLAREEAEKNGEDPEEAAAEVEARATEEEEPTDVKYAVRSGRYELCRKAG
IEPLVKKFGLTPEQFAENVRDNYQRHEVEQQPVPPLEAAAEYMSKTGSCEEVVRRAVYMC
GVQLAHEPQLRASLRDALRERATLRVRPTPRGLKEIDENHPCFSLKYLKKKPVRDLTGDQ
YLKLTMAVEDKLLEMSISENIEGNTGPSYLEELKQLYQKDEFASTVQAWNELRAEAVTIA
LTKFVMPELRRELNAVLLQESKEYVLKCCRRKLYDWLKVAPYESRVSDDDDEEWDASNGL
RVLSIAYVPDRQHSAFACVIAGGGEVADHLRLPHLLCRRNAWDAAERQNKQADLTALRRF
ILRKKPHVIVIGGESREALNVKADVSECVQQLVEDEQFPRIPIEIADNHISKIYSNSIRG
RNDFREYPDILRQAICQGRLLQDPLMEISQLCGPDEEILCFRYHPLQDQIAKEDLLEGIE
LEFVNRINEVGVDMNEAILTGRGTELLQFVCGLGPRKAQALIKLFKQTNQKLENRTQLVT
VCHMGPKVFINCSGFIKIDTSSLGDSTEAYIEVLDGSRVHPETYEWARKMAVDALEYEDE
DANPAGAVEEILEAPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNSRYKDLRVPY
RSPTHEEMFDILTKESPETFYVGKMVLATVVGITHRKPQKEMLDQANPVRNDETGLWECP
FCHKNDFPELSEVWNHFDAGACPGQATGVRIRLDNGLSGYIHIKNLSDRHVADPTERVRI
GQTVHCRILKIDVERFSVDCSSKSSDLLDKNKEWRPPKDPYYDQESEDKDVRKDVEAKQT
KERMQYVKRVIVHPAFHNISFAEAEKLMENMVQGEVIVRPSSKGSDHLTVTWKVADGICQ
HIDVREEGKENAFSLGRSLWIQGSEFEDLDEIIARHVTPMAGHARDLIAYKYYKPLGGMR
DKAEEWLKEEKAKNPNKIHYVISAAKNHPGRFLLSYLPRSRCTHEYVTVMPDGYKFRQRM
FDSLGGLLKWFKEHFRDPPPSGTPAQRTPAARTPHGLSALYHTPAAHTPAFHTPAHTPAP
NYVNTPYTPSAQTPYMTPFASTPRAPDFLPPRPAARAAPYADPSDWQKAAEDWVRHRSVR
DTPSSDISTPRHAGRTPRADSRATPRHDSRSTPRHEPRSTPHPPHPPHTPRTPHSSGRAS
RAHSVRSTPHTNTSPRSMSLGDATPLYDEN
NT seq 5133 nt   +upstreamnt  +downstreamnt
atggcagattttctagagtccgaggcagaggaaagcgacgttgattctgaggaagacgag
ggaccaacagaacgtaaaaagccaaagcgtaaagcagcggttcaaagcgacgatgaggat
gaagaggaagaagacgacgaagaacgcctccgggaggagttaaaggatttgatagatgat
gccccaatagaagactctggaagcgatggagaggactcagatgctagtgcaggacctaaa
aaaagaaagaaaagtgacgatgaattagatgatagactggaagatgaagattatgatctc
atagaagaaaatttaggtgttaaagtagcaaggaacaaattcaagcgtctccgacgtctg
gaggatgatgacagtgacaatgaaggtgccgatgaccccgagttggagagagaggtcatt
gctgaaaagttgtttgttggcggatcagatgatgaagatgaaaatcgttcagagcctgcg
ccagccaggggagatgtggaatatgatgatgagaatgaagacatggagtcggatgctgat
gatttcattgttgatgatgatgggcggcccatagcagagcgtaagaagaaacgaaagcct
atattcacagatgcatctctacaagagggtcaagacatttttggcgtagactttgattac
gatgaatttgagaagtacggcgaggaggactatgaggatgaagacgatgaagatcttgac
gagtacattgaggaagaagatgaagaaggcgatagaaggcgagctaagaagggtaaagca
aagaggcctagcaagaagtctatattcgaaatttatgagccaagtgagctcaagaggagc
cactttactgacttggacaatgagatccgtaaaacggacgtgcccgagaggatgcaaatc
cgcgaagttcccatcacgccggtggaagagggcagcactgagctggcggacgaggccgag
tggatctacaagcaggcgttcctcaagccaccggtgtccaaagctgactcgcaggaagcc
agggagaggtcccgcagaggttcgagcacaataactaagattcgccaagcgttggacttc
atgaggaaccagactttggaagtcccgttcatagcattctaccgcaaggagtacgttcag
cctgagctcaatatcaacgacttgtggaaggtgtacaagtatgatgccaagtggtgtcaa
ctgaaacagcgcaaagagaatctgctgaaactactggagaacatgagggattaccaattg
gacaaggtgatgcaaaaccccgatgcgcccattccagagaacatgagactgatcagagac
gaggatattgagaggttgaagagtgtccaaacaccggaggaactccgcgacgttcacact
cacttcctgctctactactccggagaccttcccgagatgcagaaagtgcagcgggccaag
gagaagaagaaagagttagaggagaagaagaaattggctcgcgaggaagcggagaagaac
ggtgaagatcccgaggaagccgctgcggaggtggaagctcgcgccaccgaggaagaggag
cccactgacgtcaaatacgccgtgagatcgggccgatacgagctgtgtaggaaagcgggc
atcgaacctttggtgaagaagttcggtctgacccccgagcagttcgcggagaacgtccga
gacaactaccagcgacacgaggtggaacagcagcccgtgccgcccttggaggcagccgct
gaatatatgagcaagaccggttcgtgcgaggaggtggtgcggcgcgcggtgtacatgtgc
ggcgtgcagctggcgcacgagccgcagctgcgcgcgtcgctgcgggacgcgctgcgcgag
cgcgccacgctgcgcgtgcgccccacgccgcgcggcctcaaggagatcgacgagaaccac
ccctgcttcagtctaaaatacttgaagaagaaacctgtccgcgacctgaccggcgaccag
tatctgaaactgactatggcggtagaagacaaactgctggaaatgagcatcagcgagaac
atagagggcaacaccggccccagctacctggaggagctcaaacaactttatcagaaggac
gagttcgcgtcaactgttcaagcctggaacgagttgagggctgaagcggtgaccatagcg
ctcaccaagtttgtgatgcccgagctgaggagggaactcaatgctgtgctgctgcaggag
tctaaggaatatgtactcaaatgctgccggcgaaaactgtacgactggctgaaggtggcg
ccttacgagtcacgtgtctccgacgacgatgacgaggaatgggacgcttcgaatggtctc
cgcgtgctgtccatcgcgtacgtgcccgaccgccagcactccgcgttcgcgtgcgtgata
gcgggcggcggcgaagtggccgaccacctgcggctgccccacctgctgtgccgccgcaac
gcctgggacgccgccgagcggcagaacaagcaggccgacctcaccgcgctcaggaggttt
atactccgcaagaaaccgcacgtgatcgttataggcggcgagtcgcgcgaggctctgaac
gttaaagcggacgtgtcggagtgtgttcaacaactggtagaagacgagcagttcccgaga
ataccgattgagatcgccgacaaccatatcagtaaaatatatagcaacagcatccgaggc
aggaatgacttcagagaatacccggacatcctccgccaggcgatctgccagggccggtta
ctacaggaccctcttatggaaatctcacaactctgcggccctgacgaagaaatattatgc
ttcagataccacccgctccaagaccagatagccaaagaagatctccttgaaggcatcgag
ctggaattcgtcaacagaatcaacgaagtcggtgtagacatgaacgaagctatactaaca
ggacgcggaacagagttactgcaattcgtctgcggcttgggacctcgcaaagctcaagcg
ctgataaaactcttcaaacagaccaatcagaaactcgagaaccgaacgcagctggtgact
gtctgccatatggggccgaaagtcttcatcaactgctcagggtttattaagatcgacacg
agcagcctaggagatagtacagaagcgtacattgaagttctagacggttccagagtccac
cctgagacatatgaatgggcgaggaagatggccgttgacgcgttagagtatgaagacgaa
gacgcgaatccggccggcgccgtcgaagagatccttgaagcgccagagagattaaaagac
ttagatttggacgctttcgctgaagaattagagcgacaaggcttcggaaataaatgtata
acgctgtacgatattagagctgaattgaactctaggtataaagacctaagggtgccttat
cgctcgcctactcatgaagagatgtttgatattctaaccaaagaatcgcctgagacgttc
tacgttggcaagatggtgctggctacggtggtggggatcacacacaggaagccgcagaag
gagatgctggaccaggccaatcctgtgaggaatgacgagaccgggctgtgggagtgtcct
ttctgtcataagaatgatttccctgagttgtcagaggtatggaatcacttcgacgccggc
gcgtgcccggggcaggcgaccggggttcgaatccggctggacaacggcctgtccgggtac
atccacatcaagaacctctccgaccgacacgtcgcggaccccacggagcgcgtgcgcatc
ggccagactgttcactgcaggatactgaagatagatgtggaaagattctcagtagattgt
tcgtcgaaatcctcagatttgctggataaaaataaagagtggaggccaccaaaagacccg
tactacgaccaagaatccgaggataaggacgttcggaaagacgtcgaggccaaacagact
aaggaacggatgcaatacgtgaagcgggttatagttcatcccgccttccacaatatatcg
tttgcggaggccgagaagttgatggagaacatggtgcaaggagaagttattgtccggccg
agcagtaagggttctgatcacctgaccgtgacgtggaaggtggccgacggaatctgccaa
cacattgacgttcgggaagaggggaaagagaatgctttctcgttaggtcgaagtctctgg
atacagggttcggagttcgaagacttggatgaaatcatcgctcgtcacgtgaccccgatg
gcgggacacgcccgggacctgatcgcatataaatattacaaacctttaggcggcatgcga
gacaaggcggaggagtggctcaaggaggagaaggcgaagaaccctaacaaaattcactac
gtcatatccgcagcgaaaaaccaccccggcaggttcctgctatcgtacttgcctcgcagt
cggtgcacccacgagtacgtcacagtgatgccggacgggtacaaattcaggcagaggatg
ttcgactcgctcggcgggctgctcaagtggttcaaggagcacttccgagatccgccgccc
agcggcacgccggcgcagaggacgccggccgcgcgcacgccgcacgggctgtcggcgctg
taccacacgccggccgcgcacacgcccgccttccacacgcccgcgcacacgcccgcgccc
aactacgtcaacacgccctacacgccgtccgcgcagacgccctacatgacgccgttcgcc
agcacgccgcgcgcgcccgacttcctgccgccgcgccccgccgcgcgcgccgcgccctac
gcggacccctccgactggcagaaggcggccgaggactgggtgcggcaccgctccgtgcgc
gacacgccctcctcggacatctccaccccgcggcacgccggccgcacgcccagggccgac
tccagggcgacgccgcgccacgactcgcgctcgacgccgcgccacgagccgcgctccacg
ccgcaccccccgcaccccccgcacacgccgcgcacgccgcacagctcggggcgggcgtcc
cgggcgcactcggtgcgctccaccccgcacaccaacacgtccccgcggtccatgtccctc
ggagacgcgacgccgctctacgacgagaactga

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