Amyelois transitella (navel orangeworm): 106138335
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Entry
106138335 CDS
T09957
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03013
Nucleocytoplasmic transport
atra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106138335
09122 Translation
03013 Nucleocytoplasmic transport
106138335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106138335
03041 Spliceosome [BR:
atra03041
]
106138335
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106138335
Spliceosome [BR:
atra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106138335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
ATG16
FliJ
COG6_N
DUF3450
Motif
Other DBs
NCBI-GeneID:
106138335
NCBI-ProteinID:
XP_013194918
LinkDB
All DBs
Position
8:join(2684806..2684815,2684909..2685032,2685144..2685618)
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AA seq
202 aa
AA seq
DB search
MADEDVIRRRLLIDGDGTGDDRRLNVLLKTLIKWCNSSDDKPEESKATHDRMLAQIAQCE
FAVTKSQLGSEMMAAELKSYEELSKILETGIEVAKGNIEKSKADLAQAKTVRKNRIEYDV
LAKVISEQPDRKETLERLSTLKTELSSLEATKHQLESRLALRKKQFHVLVTSIHQLQALL
DEPDDVEPMSDDVEMKEVESTT
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaagatgttatccgaagaagactacttattgacggagatggtactggtgat
gacagaaggctgaatgttttattgaaaaccttaataaaatggtgtaacagttctgatgac
aaacctgaagagagtaaagcaacacatgacagaatgcttgctcaaatagctcagtgtgag
tttgctgtgacaaaatcacagcttggttctgaaatgatggccgctgagctaaaaagttat
gaagaattatcaaaaatacttgaaactggtattgaagtggctaaagggaacattgaaaaa
agtaaggcagatcttgcacaggccaagacagtgcgtaagaaccgtatagaatatgatgtg
ttagccaaagttatcagtgaacaaccagataggaaggagacattagagcgtttgagtact
ttgaaaacggaactgagtagcttagaggctacgaagcaccaattggagagcagattagca
ttgagaaagaaacagttccacgtattggtgacatctatacatcagttacaagcactgttg
gacgaacctgatgatgtggagcccatgtctgatgatgttgaaatgaaagaagttgaaagt
acaacataa
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