Amyelois transitella (navel orangeworm): 106138418
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Entry
106138418 CDS
T09957
Name
(RefSeq) uncharacterized protein LOC106138418 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106138418
Transcription factors [BR:
atra03000
]
Eukaryotic type
Other basic domains
RF-X
106138418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Motif
Other DBs
NCBI-GeneID:
106138418
NCBI-ProteinID:
XP_013195013
LinkDB
All DBs
Position
4:join(7077305..7077591,7078662..7078808,7079053..7079148,7079821..7079937,7082029..7082104,7082510..7082573,7082784..7082891,7084810..7084868,7085085..7085243,7085808..7088450)
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AA seq
1251 aa
AA seq
DB search
MDSASPFQPWASDDSAKNVKTETDLVDDAKLHRENVNHPKHTQTASYDKESVAVSTNAPG
SSGAAGTGADSARSFETKMDSAKIASMQQIVENTISQEGRQRVAQLLEAVEALTGAERLL
LYLRLPTGVPPHDPLKQPINPLGSRAELQQTVTWIQTHLEVDPDVSLPKQDVYDEYIAHC
VSSNMKPLSTADFGKVMKQVYPTVRPRRLGTRGNSRYCYAGLRKKIKLEVPQLPDLSESS
KEVNVTARETERIVCEWAETKLGVKFSNISELSRHLSTSAAPLAPPGPASSSPPPQSHLS
QDDATSRHLMKQLKRKIQTQGTPGRPKKNKETTGESPPSTSYGAPHPPHKLEELAPEPGY
AYQPPYVPVYEVRAPYPAYSAPPRAHPAPGGAYHFEPYAPRDLSLPAEPHNVPINLSSDA
SLDLRRRPPDPPPPRLPLPGKKLILETYQSETQAARPAPAPAYLPKKMRAAEILGGKLAA
ARLAAHDAPARSDAAFLEDPKNLTSRSTSTAAALAREQQEAASPTRAADAPTRARRRPEP
EPDACLGLNIKTPVICEEKHSEILNRERVISICNIDKHDLDDYLNEGNSQEHEEELLRYF
NQRDADADPDAVTQDAAAFLGTGQDPLDEHSQGKNEKISQLRELLAKNLKNQSGSANVVA
SNSQPDQEPHNSQETSHEQLLKPVPPSEGAFKPLVGGTSADVSSGPILPNQMVTMNGNKN
GNMHPIENGAPMPYVNENAPKQNVANISSAQNYNGHSNTEPQSPTTRTQQYEFVPISDGC
HSPGRFHSKSPLGFGQRGNSPIKVNKQIVMGGSLQTSPISHSTAASPFVSPRNTPVPRSR
HCSRPIPKPGRKGRRNPPSLGMTDGKHFAMPNEQKFMCKTTQDIARQISVPNKYCQPMSA
PPSPNILTSQYKPQMFGVPNGNGHHNLNFLPSTPFREHMNGDLTQPLSADPLSSEVSQFF
PETPLQYRPGLDTSFRSQSVPLKPGMNNIGLLSYNNTPVGSVPPTPVPNEFCDFGNLTET
CDISKACLNPETLDKIYNAIDSSNDVLNSNSTASLLNSNDHMRNGCDPLPDQQILSDEQL
SSLIPNDELLDRNSQFNQSFNNNSAPDNVEDFLKRTNSLEFDLSELETDKNKYYTSRSVP
STPLPYKRTAPNLHIDPRRSRELFPAESYPAMSNGISSKSVPSTPQLADERNVFSYSNRD
FLINGNSVCGSNQMHGIVVDNDQELTSPPYDMLQGDILEPLTLADLDNVDL
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgcaagtccatttcaaccttgggcttctgatgatagtgcgaaaaacgttaaa
actgaaacagatctagtggatgacgcgaaacttcatcgggaaaatgtcaatcatccaaaa
catacgcaaactgcgtcttacgataaagaaagtgtcgccgtttcaaccaacgctcctgga
tcgtccggcgccgcgggcaccggcgccgattccgccaggagtttcgaaaccaaaatggac
tctgccaaaatagcttctatgcagcagattgtggagaacactatcagccaagaaggacgc
caaagagtagcacaactgttggaagcagtagaagcattgacaggtgctgagaggttgcta
ctctacctgcgactgcccactggtgtgccacctcatgacccattgaaacaaccaataaac
cctcttggctccagagcagaacttcaacagactgttacatggatacagacccatttagaa
gttgaccctgatgtttctcttccgaagcaggatgtttatgatgaatatatagcacactgt
gtaagcagtaacatgaagccactgtcgacggctgacttcggtaaagtcatgaagcaggtg
tacccgaccgtgcgacctcggagactgggaacacgcggcaactctaggtattgttatgct
ggactgcgtaaaaaaatcaagttagaagtgccccaactgccagacttgagtgaatcatcc
aaggaagtaaacgtaactgctagagaaacggaaagaatagtatgtgaatgggctgaaacc
aaattaggtgtgaaattctctaacatatcggagttgtcgaggcatttgtcgacgtcggcg
gcgcccctcgcgcctccgggcccggccagcagttccccgccgccacaatcacatttatcg
caagatgatgcaacaagtcgacacttgatgaaacaactgaaaaggaaaatacagacacag
ggtacgcccggaaggccgaagaagaacaaggagactaccggcgagtctccgccgtccacg
tcgtacggcgcgccccatccgccgcacaagctcgaggaactggctcccgaacccggctac
gcgtaccagccgccgtacgtgcccgtctatgaggtccgcgcgccgtaccccgcgtacagc
gcgccgccgcgggcgcacccggcgccgggcggcgcctaccacttcgagccctacgcgccg
cgcgacctgtcgctgcccgccgagccgcacaacgtgcccatcaacctcagcagcgacgcg
tcgctggacctgcggcgccgcccgcccgacccgccgccgccgcgcctgccgctgcccggc
aagaagctcatcctggagacgtaccagagcgagacgcaggcggcgcggcccgcgcccgcg
cccgcgtacctgcccaagaagatgcgcgccgcggagatcctcggcggcaagctggcggcc
gcgcgcctcgccgcgcacgacgcgcccgctcgttccgacgccgcttttttagaggatcca
aaaaacttaacgagccggtccacgagcaccgccgcggcgctggcccgggagcaacaggag
gcggcgagtcccacgcgggcggcggacgccccgactagagcgcggcgccggcccgagccc
gagcccgacgcctgcctcggcctcaacatcaagacgcccgtcatctgcgaggagaagcac
tccgagatactcaacagggagcgcgtcatcagcatctgcaacatcgacaagcacgacctc
gacgactacctcaacgagggcaacagccaggagcacgaagaggagctgctgcgctacttc
aaccagcgcgacgcggacgccgaccccgacgcagtcacacaggacgcggccgctttttta
gggacgggccaggacccactggacgaacatagtcagggtaaaaacgaaaaaatatcgcag
ctccgggaactgttggccaaaaacttgaaaaaccaaagtgggtccgccaatgttgtagcc
tctaattcgcagcccgatcaggaaccccacaattcacaagaaacctctcacgaacaactt
cttaaacctgtaccacctagcgagggagcgttcaaaccccttgtaggcggtacgtctgcg
gatgtttcaagcggtccaatattgccaaaccaaatggtcactatgaacggaaacaaaaat
ggcaatatgcacccgatagaaaatggcgcccctatgccatatgtaaatgagaatgcgcct
aaacaaaatgttgcaaatatttctagtgcccagaattacaacggtcattctaatacggaa
cctcaaagtccgacgactagaactcagcaatatgaatttgttcccatatccgatgggtgc
cattctcctggacgctttcattctaaatcgccattagggttcgggcagcgaggtaatagt
cccataaaagttaataaacaaatagttatgggtggttcattacaaacatctccgatatcg
catagtacagcggcgagtccttttgtgagtcctagaaatactcccgtgccgcgatcgcgt
cactgctcgcgaccaatccccaagccaggaaggaaaggaagacgaaatccgccgtcgtta
ggcatgaccgacggtaagcattttgctatgccaaacgaacagaaattcatgtgcaagact
acacaagacatcgcgcggcaaataagtgtaccgaacaagtactgtcagccgatgtctgcg
ccgccttctcccaacattttaacttcccaatacaagccgcaaatgtttggagtcccaaat
ggcaatggccatcacaacttaaatttcttgccaagtacaccatttagagagcacatgaat
ggtgatttgactcaaccgctgtctgctgatcccttgtcgagcgaagtgagtcaatttttc
cccgaaacgccgcttcaatatcggccaggcctagatacttcgttccggtcgcagtcagtg
ccgctgaagcccggcatgaacaacataggactcctcagctacaacaacacgcccgtaggc
tcggtcccaccgactccagtgcccaatgagttttgcgattttggtaacctcaccgaaact
tgtgatatatctaaagcctgcctcaatcccgaaaccctagataaaatttataacgccata
gacagtagcaacgacgtacttaattctaactctacggcgagcttactaaattctaatgac
cacatgagaaacggttgtgatccgttgccagaccaacaaattctttcagacgagcaactg
agctcgctcatacctaacgacgagctcctcgacagaaacagtcagttcaatcagtccttc
aacaacaactctgcgcctgataacgtggaagatttcctgaaacgaacgaatagcctggaa
ttcgatctgagcgaattagaaaccgataagaataagtactacacgtcccgatcagtgcct
agcacgccgttaccttacaaacggactgcgccgaacttgcacatagaccctcgtcgctcg
cgggagttgttccccgcggagagctacccggcgatgtcgaatgggatctcgtcgaagtcc
gtgccgtcgacgccgcagctggctgacgagcgcaacgtgttcagctacagcaaccgcgac
tttctcataaacggcaactccgtgtgtggctccaatcagatgcacggcatcgtggtggac
aacgaccaggagttgacctctccgccttatgatatgctgcaaggagatatcttggaacct
ctgacgctggccgacctcgacaatgtcgatctctag
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