Amyelois transitella (navel orangeworm): 106138710
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Entry
106138710 CDS
T09957
Name
(RefSeq) parafibromin
KO
K15175
parafibromin
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atra03021
]
106138710
Transcription machinery [BR:
atra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
106138710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_N
CDC73_C
Top6b_C
Motif
Other DBs
NCBI-GeneID:
106138710
NCBI-ProteinID:
XP_060810258
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All DBs
Position
4:complement(join(5728409..5728445,5728888..5729029,5729442..5729583,5730422..5730539,5731035..5731212,5731604..5731741,5731853..5732024,5732217..5732439,5732902..5733047,5735239..5735358,5735443..5735551,5735660..5735790))
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AA seq
551 aa
AA seq
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MADPLSLLRQYNVNKKEIIERDNQIIFGEFSWPKNVKTNYLMWGSGKDASHVKEYYTLEC
LLFILKNIQLTHPVYVRQAAAANIPAVRRPDRKELLAYLNGETATCASIDKSAPLEIPTQ
VKRTHDHDGGESAAKKPRIEETHVQKVREQLAARLDAPKEASVTVDNIKSLSDAMSVEKI
AAIKAKRLAKKRTTIKSNDYTDNLVVGSDLRAILDYDVDLTKDIISRERQWRTRTTVLQS
NGKTFSKSILALLASIKAREEGRPGIPRPPPVVMPQPTILPAQQTQYNRYDQERFNRQKE
ETEGFKIDTMGTYHGMTLKSVLVPEGPSVPAAARAPQTPNHPRQMQRPISSSTPGGPRRE
LLPAAAARAPAGGGKRPSRTPIIIIPAATTALISMFNVKDMLQDLKFVPVEQKKAEGSVR
ENEVLLQRRKGATGDQVPNNANSTTVPYRVVDNPARLSAAEWDRVVAVFVQGPAWQFKGW
PWDGNPVQIFANICAFHLKFDEMKLDANVARWAVTVLNLSRTKRHLDRAVLLGFWETLDK
HMMKNKPHLRF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccgttgagtttgcttcggcaatacaacgtaaataaaaaagagattatcgaa
cgtgataatcaaattatatttggggagttttcttggccaaaaaatgttaaaaccaactac
ctcatgtgggggtctgggaaggatgcctcacatgtcaaggaatattacacgcttgaatgt
cttctattcattcttaaaaacattcaactgacacatccagtttatgtgcgtcaagcagct
gcagcgaatattccggctgtccgtcgtccagatcgtaaagagttattagcatacttgaat
ggagaaactgctacctgtgcttccattgacaaaagtgcacctctggagataccaactcag
gtaaaacgcacccatgaccatgacggcggagaatctgcagccaaaaagcctcgtattgaa
gaaacacatgtgcagaaagtacgcgagcaacttgcggctcgtcttgatgctccgaaagag
gcgtctgtcacagttgataacatcaagtccttatcagatgctatgtcagttgagaaaatt
gctgctatcaaagcgaaacgtttagctaaaaaaagaacaacaatcaaaagcaatgattat
acagacaacttggtggttggatctgatttgcgggccatccttgattatgatgttgatctc
acaaaagatatcattagtcgagagaggcagtggaggaccagaacaacagtattacaaagt
aatggaaaaacattttcgaagagtattctggcactattggctagtatcaaagctcgagag
gaaggaagaccaggaatcccgcggcctccaccagttgtaatgccacagccaaccatttta
cctgcacagcaaactcaatacaacagatacgatcaggaaagatttaataggcaaaaagaa
gaaactgagggtttcaaaatcgacactatgggcacataccacgggatgaccctaaagtct
gtgttggtgcccgaaggcccgagcgtaccggctgcggctcgcgctccccagacaccaaat
catccgcggcagatgcaacgtccgatatctagcagtaccccgggcgggccccgacgcgag
ctgctgccggccgcggcggcgcgcgcgccggcgggcggcggcaagcggccgtcgcgcacg
cccatcatcatcatccccgccgcaaccaccgccctcatatccatgttcaacgtcaaggac
atgttgcaggacctcaaatttgtacctgtggagcaaaagaaagccgaaggttctgttcgt
gaaaacgaagtactgcttcagaggaggaagggagccaccggtgaccaagttcctaacaat
gcaaattcaaccacggtgccataccgtgtagtggataacccggccaggttgtctgcagcg
gagtgggaccgagtggtggccgtgttcgtgcagggcccggcttggcaattcaaaggctgg
ccgtgggatggaaatccagtgcaaatatttgctaacatatgcgcttttcacctgaaattc
gacgagatgaagctggacgcgaacgtggcccgctgggccgtcacggtactcaacctgagc
cgcaccaagcggcatctcgaccgcgccgtgctgctcggcttctgggagactctagacaag
cacatgatgaaaaataaaccacatcttaggttctaa
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