KEGG   Amyelois transitella (navel orangeworm): 106138771
Entry
106138771         CDS       T09957                                 
Name
(RefSeq) integrin alpha-PS2
  KO
K06584  integrin alpha 8
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra04512  ECM-receptor interaction
atra04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:atra00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106138771
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106138771
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:atra04515]
    106138771
Cell adhesion molecules [BR:atra04515]
 Integrins
  Integrin alpha subunits
   106138771
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP FG-GAP_3 Integrin_alpha LYRIC
Other DBs
NCBI-GeneID: 106138771
NCBI-ProteinID: XP_060810781
LinkDB
Position
5:complement(join(1424239..1424316,1424968..1425198,1425559..1425705,1426164..1426255,1426388..1426971,1427232..1427712,1427817..1427882,1428620..1428754,1429252..1429427,1429906..1430063,1430340..1430595,1430790..1430983,1431125..1431267,1432093..1432259,1432560..1432794,1432999..1433098,1433317..1433523,1433699..1433865,1435555..1435623,1435854..1435902,1448342..1448403,1449667..1449793,1477368..1477465,1504144..1504292,1545895..1546046))
AA seq 1440 aa
MTMAVFLCVLLFAVGALGFNVDVPSRVVYTGNHNSMFGFTVQSHMEHGRTTVLVGAPEDE
PYQVEGVTRPGAVYRCNTAPRGYKDRGLSECALMDFDKIRVNNKDQRHQQIDQKSNQWFG
ATLSSSGSNGPIVACAPRFVSYVTAKLNQRDPVGTCFVAKTLDAKDVDEISPCRTSSHGQ
RKSGVCQAGFSAAVAKDGMRMFMGAPGSFFWQGRTFSLDLTIEDHYYYMPPIPEEGQLFS
RNSTYLIATTEANPKYDDSYMGYSMTVGDFAGPGIQSVAVGVPRGSDLKGLVVLYTWELE
PIKNISGSQIGAYFGYSLAAGDFDGDGADDIVIGAPMFVKPKSDGYEHGRVYIVYQGRDR
TFTKNHARTGEVSRGRFGLAVTSLGDINYDGFGDIAVGAPYAGENGRGVVYIYQGSALGI
REKYSQAITAEEVSPTLSTFGFSLSGGVDLDGNSYPDLVVGAYKSDSAVFFKSRPVVQVT
AEVKFMGDDKLISLTDKSCQLHNGTFVSCAHIMFCLTYDGVNVDQQIKFEVKIELDSRQK
TTKRLFLERRETTYTTHILVMQKQNSCRNITAYLDEEIRDKLTPIEVKMSYNLVSQPSGD
VVPPVLDQIQSIVHTDSLHILKNCGPDNICVPDLRMAATSPVINYLLGSGENINIDVKVE
NIGEDAFEAAYYLQLPPGVTYAKMERLDKDVVDVVHIYCTVKNKGPSGNSTLKCDLGNPL
QSGKKVNFRLILEVDARVNKLVFDMETNSTNPEQGTRYDNVKKMVIDVVTKAHLSVIGTS
DPPELHYNASLYDSANLTDDSQLGPLVIHKYNIKNEGPSSVGEAEIIIMWPYQTLSGENL
MYMLVQPQWVGNMKCDVARHVNPDEIYVQNPYLFHLNKEKDAMLKSELYTASQISGGSGY
YGQSNWEISQGSTHVSGSQYGAGQASTGHSATGHGYSQGQGFSQGQGFNQGQGFNQGQGF
AYNKTYDATLSVDEQEQIRRQLASMNKNQASNSGQSWSSQGNYQSNWQSGQGSGQAGYGQ
GGYVRIKNRTVLMDEHGRVISESETSTEYGNLGHEGEAGSSFNKYANRRYGSGQHVSQGS
QAGSSVYQGSSHAYQGSNSQAAGQAFGQSSSHGSNQGFGYWSTTETVNPDIAKAGSSTYR
ANLPPTVVGDEEEDNIGGIGAYAAQGSNNEFKYGIADVTNAGSQGASHQSSGSYQGGNSY
QSGSGSYQGGYQAGGSGYQGGSGSYQAGGGSYRAGGGYQTSGGSYQRSGGGYSYSSQSGG
ASSYSSHSEGGFAASSGGREATRRRRQDQVDTQLKEILEKCEEKYKCAVVRCTTGALLKD
QEVWLALRSRINASVLNEISKERAVKLSTLTATRISYLPSVGRPLDQSWHTAEAQTLITP
QLEALESGSIPLWVVVLAAVAGALLLLLLIFALYKCGFFKRNRPSDHAERQPLNGHDEHL
NT seq 4323 nt   +upstreamnt  +downstreamnt
atgacgatggcggtttttttgtgtgtgctgttgttcgctgtaggagccttggggttcaat
gtggatgtaccttccagggtggtgtatacagggaaccataattccatgttcggattcaca
gtgcagtcccatatggaacacgggcggactacggtactagtgggcgctccagaagacgag
ccctaccaggtggagggagtgacgcggcccggcgccgtgtaccgctgcaacacggcgccg
aggggatacaaagacagaggtctctctgaatgtgcgctcatggacttcgataagatcaga
gtgaacaacaaggaccagcgtcatcagcagatcgaccagaagtccaaccagtggttcgga
gccacgctcagcagcagcggcagcaatggaccgattgtcgcatgcgctcctcgcttcgtg
tcgtacgtgaccgctaaactgaaccagcgagatcctgtgggcacctgcttcgtggccaaa
accctcgacgccaaggacgtggacgaaatctccccctgtcggacgagcagccacgggcag
cgaaaatcaggggtttgccaagctggattttcagcagccgttgccaaggatgggatgcgt
atgtttatgggagcccccggcagctttttctggcaagggcgaacgttttcactagatctt
actatcgaagaccactactactatatgccgcccataccagaagaaggtcaattattctca
agaaattcgacgtaccttattgcgactaccgaagccaatccgaaatacgatgactcttac
atgggctattctatgactgtgggagactttgctgggccgggaatacaaagtgttgctgtt
ggtgttcctaggggatctgatttgaaaggattggtggttctatacacatgggagctagag
cctatcaagaatatcagtggttctcaaataggagcttacttcgggtacagtcttgcagca
ggtgattttgatggagatggcgctgatgacatcgttattggcgctccgatgtttgtcaag
cccaaaagtgatggatatgaacatgggcgcgtgtacattgtctaccaaggacgggatagg
actttcaccaagaatcacgctcgcactggtgaagtgtcgcgaggtagatttggtttggct
gtcacatccttaggcgatatcaattacgatggttttggagatatcgctgtgggtgctcct
tacgctggtgagaatggccgtggcgtggtctatatctaccaaggtagtgctctgggtatt
cgagagaagtactcgcaagccatcaccgcagaagaggtctcacccaccttgtcaaccttc
ggcttctctctgtcgggaggagttgatctggatggaaacagttacccagatttggttgtg
ggcgcttataaatctgattcggcagtgtttttcaaatcccgaccggtggtgcaagtgaca
gcagaagttaagttcatgggtgacgacaaactgatctctctgacagacaagagctgccaa
ttgcacaacggcaccttcgtctcctgcgcacacatcatgttctgcttgacttacgacgga
gttaacgttgatcagcaaataaaattcgaggtgaagatcgaactggactcgagacaaaag
accacaaagagattgttcctggagcgtcgggaaacaacatacaccacgcacattctggtg
atgcaaaaacaaaactcttgcagaaacattacagcttatcttgatgaggaaatccgagac
aaactaaccccgatagaagtaaagatgtcatacaatctggtgtcccagccatctggtgac
gtagtacctcccgtgctagaccagattcaaagcattgtccacaccgactcgcttcacatt
ctgaagaactgcggcccggataacatatgtgtaccggaccttagaatggctgctacttcc
cccgttataaactacctcctcggctctggtgaaaacatcaacatcgatgtgaaagtggag
aacattggtgaggatgccttcgaagctgcttactacctccaactgccccctggcgtcacg
tacgcgaagatggagagactggacaaagatgtggtggacgtagtacacatttactgcacc
gtgaagaataagggaccaagtggaaatagcaccctcaaatgtgacttgggaaatcctttg
cagagcggcaagaaggtcaacttcagactgatcctggaagtggacgcccgagtcaacaag
ctggtgttcgacatggagaccaactccaccaacccagagcaaggcactcgctacgacaac
gtgaagaagatggtcatcgatgttgttaccaaggcgcacctctctgttataggtacctca
gatccgcccgaactccactacaacgcttcgctatatgactctgcgaacctgactgatgac
tctcaacttggtcctttggtcatccacaagtacaacatcaagaacgagggcccttcctcc
gttggggaagccgagatcatcatcatgtggccgtaccagaccttgagtggcgagaacctg
atgtacatgctggtgcagccgcagtgggtgggcaacatgaagtgcgacgtggcgcgccac
gtcaaccccgacgagatctacgtccagaacccgtatctcttccacctcaacaaggagaag
gacgcaatgctcaagagcgaactgtacaccgcctctcaaatatcgggaggaagcgggtat
tacggacaaagtaattgggaaatctctcaaggcagcacccacgtatctggcagtcaatat
ggcgcaggccaggcatcaacaggccactcggcgacaggccatggctacagtcaaggccaa
gggttcagccaaggccaaggattcaatcaaggccaaggattcaatcaaggccaaggtttt
gcatacaacaaaacctatgacgcaactttgtccgttgacgaacaagaacaaatccgacga
caattggcttctatgaacaagaatcaagcatcaaattcgggccaaagttggtcgagtcaa
gggaattaccaaagcaattggcaatctgggcaagggtcaggtcaagctggatacggtcaa
ggaggctatgtgaggatcaagaataggacggtgcttatggatgaacatggaagggttata
tctgagtcggagaccagtacggagtatggaaacttgggacatgaaggagaagctgggagc
tcgttcaataagtacgcaaacagacgttacggatcaggccagcatgtctctcaaggctcg
caagctggctccagtgtctaccagggctcctcccacgcctaccagggctccaacagccaa
gccgccggtcaagcgttcggccaaagttctagccatggttccaaccaaggtttcggatat
tggtcaacaacagaaaccgttaatcctgatatcgccaaagctggttcttcaacttaccga
gcgaacctacctccgacggtcgtaggtgatgaggaagaagataatattggaggaattggt
gcttacgcagcgcaaggttctaataatgaatttaaatatggcattgctgatgtaacaaat
gctgggtcccaaggagctagccatcaatctagtggatcatatcagggaggaaacagttat
caatctggaagcggcagttaccagggcggttaccaagccggaggcagtggttaccaagga
ggaagtggaagttatcaagctggcggtggtagctatagagccggtggtggatatcagacc
agcggtggaagttatcagagaagtggtggtggatactcttattcttcacaatcaggtggt
gcatcatcgtacagttcacattctgaaggcggctttgcagcatcaagtggaggtcgagag
gctactagacggcgtcgccaagatcaggtggacacgcaattgaaggagatactagagaaa
tgcgaagagaagtacaaatgcgctgtagtgaggtgtacgacgggagcgctcctgaaggac
caagaagtctggcttgccttgaggtccagaatcaatgcatcagtactcaatgagatctcc
aaagaacgagccgtaaaactatcgactctaacggcgactcgaatctcgtacctcccatca
gtgggccggcctctcgaccagtcctggcatacggccgaggcgcaaactctgatcacacca
caattagaagccctggagagtgggagcataccattgtgggtggtggtgctggcagctgtc
gcaggagcattgttactgcttctgttgatatttgccctatacaagtgcggcttcttcaaa
cgcaaccggccgtctgaccacgcggagcgccagccgctgaacggccacgacgagcacctc
tga

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