Amyelois transitella (navel orangeworm): 106138774
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Entry
106138774 CDS
T09957
Name
(RefSeq) transcription factor egl-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106138774
Transcription factors [BR:
atra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106138774
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
106138774
NCBI-ProteinID:
XP_060806344
EnsemblRapid:
LOC106138774
LinkDB
All DBs
Position
21:join(4453331..4453380,4623753..4624286,4639861..4640005,4678415..4678585,4682695..4682917,4688953..4689247,4689603..4689852)
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AA seq
555 aa
AA seq
DB search
MTLYVVNSDSRTIWTKRNMSSKRKSPPSKLQEGAADSDKPEPGPATLEFSDQPESDPEQQ
TFYKFSPSSSTRSSISEEGSNYDDERPPKKQRFDTDMTNNLLVPGPFLGLHQVNDLQGRR
RGSSECSSPGAEAKVLSLCNNNNSLLNHNSALSLAPPHKRSMDDVLKRLTSKMNNSTIKE
EKRPTPSTTPVKHNNERRGVLDAAALQALAGESVLEKERQLSEMILQLQMVREQLLSQQE
QAKNLGNVTAELELQRLQQEHLRRQELVRRGQHGLYPGPPLALLPLLEQMRPQPPQAPQN
VPSQWPATAQLAQLTASARSSPPQDPDAPLNLSKQRSPSPQQSMMLPRFVPYPPMDESPQ
YSMQKEEDYNSACNTSSWAQSAQEESDKAKLVRQPKRDEAGKPHIKRPMNAFMVWAKDER
RKILKACPDMHNSNISKILGARWKSMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKR
TCIVDGKKMRISEYKNLMRSRRQEMRQLWCRDGGSEMGFLPSLSSPGPSNSSPPPNGGNY
MNQAFSPPLSPREDD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgactttatatgttgtaaacagcgattcacgcactatttggactaaaagaaacatgtca
tctaaacggaaatcaccgccgtccaaattgcaagaaggcgccgctgattccgacaagccc
gagcccggccctgccaccctggagttctccgaccagcccgagtccgaccctgagcagcaa
accttctacaagttctcaccgagctcctcaactagaagctccatcagcgaagaaggctca
aattacgacgacgagagaccaccaaaaaagcaaagattcgataccgacatgacaaacaat
ctcctagtccctggcccttttttaggtcttcatcaagtgaacgaccttcaaggcagaaga
cgcggctcctcggaatgcagtagtccaggtgctgaggcgaaagttttgagcctgtgtaac
aataataattcactgctgaatcataacagcgcgttgtctctcgcgccgcctcataagcgg
tcgatggatgatgttctaaagagattaacgtcgaaaatgaataatagtactattaaggaa
gagaagaggcctacgccttcgactacgcccgtgaaacataacaatgagcgaagaggagtg
ctagatgcggctgctctgcaggcgttagccggagaaagtgtgctggagaaggaacgacag
ctgtcagagatgatccttcaactgcaaatggtgagggaacagctgctgtctcagcaagag
caggctaagaacctgggcaacgtcaccgcggagctggaactccaaaggctgcagcaggag
catctccggagacaggagctggtgcggcgtggacaacacgggctgtaccctgggcctccc
ctggccctgctccccctgctggaacagatgagaccacagcctccacaggcacctcaaaat
gtcccaagccaatggccagcgacggcgcagctagcccaactgacggccagcgcgcgatct
tcaccaccccaggaccccgacgcacccctcaacctcagcaagcagcgatccccctccccc
cagcaatctatgatgctcccccggttcgtgccataccccccaatggatgaaagcccccag
tacagcatgcagaaggaagaggattacaactcagcttgcaatacatcttcatgggcccaa
tcagctcaggaggagtccgacaaagccaagttggtgcgccagccgaagcgggacgaggcc
gggaagccacacatcaaacggccaatgaacgccttcatggtctgggctaaggacgagcgc
aggaaaatcctaaaggcctgccctgatatgcacaattccaacatatcgaaaatcctagga
gcaaggtggaaatcaatgtcgaatgctgagaaacagccgtattacgaggagcagtcccgg
ctttccaagttacatatggagaaacatcctgattataggtacaggccaagacctaaaaga
acatgcattgtagacggcaagaaaatgcgaatatcagaatacaagaatctcatgcgctcg
cgcagacaagaaatgcggcagctgtggtgcagggatggggggagcgagatgggtttcctt
ccctctctgtcatcccccgggccttcaaattcgtccccaccgcctaatggtgggaactac
atgaaccaagcgttttcgccccctctttcaccaagagaggatgattga
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