KEGG   Amyelois transitella (navel orangeworm): 106138855
Entry
106138855         CDS       T09957                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106138855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106138855
   03036 Chromosome and associated proteins [BR:atra03036]
    106138855
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     106138855
   Coactivators
    SAGA/TFTC/STAGA complex
     106138855
Chromosome and associated proteins [BR:atra03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     106138855
    STAGA complex
     106138855
    TFTC complex
     106138855
    SAGA complex
     106138855
    SLIK complex
     106138855
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 TFIID_NTD2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_1st CFAP251_N WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_Aladin NBCH_WD40 Beta-prop_WDR41 PAC11 Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_RIG_2nd DSE1_N ANAPC4_WD40 WD40_RFWD3 ASA1 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_SCAP Ge1_WD40 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 Tricorn_2nd eIF2A TRM82_WD Beta-prop_Nup120_160 WD40_like
Other DBs
NCBI-GeneID: 106138855
NCBI-ProteinID: XP_060800929
LinkDB
Position
2:complement(join(6947275..6947486,6948080..6948260,6948355..6948468,6949356..6949549,6949802..6949939,6950436..6950511,6950895..6951084,6951171..6951372,6953133..6953332,6953589..6953791,6954029..6954214,6954296..6954358))
AA seq 652 aa
MGDKSTPLLAVLQLLRKYNLKGTEDILRKEASLGDVELESLDLPEVELASILTAHHTESD
PYSYEFAYDSLKKFIENSLDMYKYELSMLLYPVFVHMYMLLILYDHNEHAINFLEKFRAE
QEDYYQDDLNKLAIVKHKDQIKGNELAEIYSSNKFVVQLSRDASSQLKRYLHEQKNSTVI
INIINNHIQLDVHDGPGRTQAQLRATAGGVLGEAAKNENRTKVYYGLLKEPDIQVLPAPI
EDEEEVEETPDKPKKKKAKKDNIFMKKPKSDPNAPPNDRIPLPELKETDKIEKGKALREA
SKRIPLGPESLPSICFYTLLNSGHTALCADICDDSTLLAVGFNNSNIKVWTLTTVRLRGM
KSAEKLQDIDREAGDVLVRMMEEKDRDTCRTLFGHSGPVYKVGFDPFKALLLSCSEDSTV
RLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFVSCGHDRTARLWATDHHQPLRIFSGHL
SDVDCVQFHPNSNYVATGSSDRTVRVWDCLTGTQVRIMTGHKSSVFVLAFSVCGRWLASG
GGAGELMVWDLSTGLPTASLPPSHTAPIHALAFSRDGTILASGSLDCSIKLWDFIAITEE
VQNEEIGTSNSTFQKDDKCLLRSFPTKNSPIKGLHFTRRNLLLGVGSYEGSS
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgggggacaaatcaacacctttgttggctgttttacaacttcttcggaagtataatttg
aagggtactgaagatatcttgcgtaaggaagcaagtttaggagatgttgaattagagagt
ttggatttgcctgaggtggaattagctagtatacttacagctcatcacaccgaaagtgat
ccatatagttacgagttcgcatacgatagtttaaagaagtttatcgagaattcattagac
atgtacaagtatgaattgtcaatgctgctctatccagtatttgttcatatgtatatgttg
ttaatcttatatgatcataatgaacatgctataaacttcttggagaaatttcgtgctgag
caggaggattattaccaagatgatctaaataaattagctattgtgaaacataaagaccaa
ataaagggaaatgagctggctgaaatatacagttccaacaaatttgtggttcagctttca
cgtgacgcatcatcacagctgaaacgctatttacatgaacaaaagaactcaactgttatc
atcaacatcataaacaaccacattcagctagacgtgcatgatgggccaggtagaacccag
gcacaattacgagccacagccggtggagttctaggagaagctgcaaaaaatgaaaatcgt
accaaagtttactatggattattgaaagagccagacatacaagtgcttcctgctccaatt
gaagatgaagaggaagttgaggaaactccagataaacccaaaaagaaaaaagcaaaaaag
gataacattttcatgaaaaaacctaagtctgatccaaatgctccaccaaatgacagaatt
ccactgccagaattgaaagaaactgataagattgaaaaaggaaaggccttaagggaagct
tcaaagcgtattccacttggtcctgagagccttccttcaatatgcttctatacactgctg
aatagcggtcacacagctctctgtgcagacatttgtgatgattccactttgctggctgtt
ggttttaataattctaatataaaggtatggactcttaccacggtaagacttcgtggcatg
aaatctgctgaaaagttacaggacattgacagagaagcaggtgatgttctcgtccgtatg
atggaagaaaaagacagagatacatgccgcacattatttggtcattcagggccagtgtat
aaagtcggatttgacccattcaaagcattattattatcatgctccgaagattccacagta
agactgtggtcacttcaatgctggacctgcctcgtagtgtaccgaggccacgtgtggcca
gtgtgggacgtgaggtggtctccacacggacactacttcgtgtcgtgcggccacgaccgc
acggcaagactctgggccactgaccatcatcagccgctaagaatattttctggacacctt
tccgacgttgactgtgttcaatttcacccaaattctaattatgttgcaactggatccagc
gaccgcactgtcagggtctgggactgtttaactggaacacaagttcgaatcatgactgga
cataagtcttcagtatttgtactggcattttctgtatgtggacgatggctggcgtcggga
gggggcgcaggcgaactcatggtgtgggacttgtccaccgggctgcccacggcttcgctg
ccgccgtctcacacggcccccatacacgcactagcatttagccgagatggcactatttta
gcttcagggtctttagattgcagcatcaaattatgggatttcattgctataacagaagaa
gttcaaaatgaagaaattggcactagtaatagcacttttcaaaaggacgacaaatgtttg
ttacgctcattcccaacaaaaaattcgcccatcaaaggtctacattttacacgccgcaat
ctacttcttggagtaggatcctatgaaggaagctcgtaa

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