Amyelois transitella (navel orangeworm): 106138902
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Entry
106138902 CDS
T09957
Name
(RefSeq) tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atra03016
]
106138902
Enzymes [BR:
atra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
106138902
Transfer RNA biogenesis [BR:
atra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106138902
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
AcnX_2nd
Imm49
ApbE
Motif
Other DBs
NCBI-GeneID:
106138902
NCBI-ProteinID:
XP_060808963
LinkDB
All DBs
Position
30:complement(join(4788076..4788254,4789035..4789224,4789589..4789685,4790510..4790616,4798527..4798629,4799137..4799250,4800556..4800773,4801212..4801351,4802410..4802519,4802980..4803224,4803690..4803812))
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AA seq
541 aa
AA seq
DB search
MDKKAIFKLCKDQGCCDACAVRFLGVKHPNAYENLKKHIIQYQDTTSEPTTATDSTTPVE
HSQTLDTVQQPSENGHSEENNSEDGPLRKRRRTEACVCCLGVLEEETWPECDEMVKEVLD
KKGYDCQTFACALSSPISILLREKVITLKIQDAIPDYDPTALTPLKEAWKWLYGPRLARV
AGKAQDSGAVCPLLVTVTMEYHNEAAELELLKLISPQLFESRSRQKRRFAVEFTRRSAEQ
ALAASADDVRRAATLLPPAARARCVSVACCRDPIYIGGRYVKLSRELPQTPWLVGGKRMM
ESSVQEVIFNPLAEILGIPPSQSEHRLKLMSAGREDVDVRCLGDGRPFAVEVADPRHAPT
PEQLRAVCAAVAASGAVRVRSLCVVSKEELAELKQGEESKCKTYEALCIKLSHSKFETEK
TPSDPVTVTPEDLQRINTFRNTAESHGAVVAVTQRTPIRVLHRRPLLSRQREILKVQADA
VTGHPQLFTLHVQTSAGTYVKEWVHGELGRTAPSLGDAIKAKVDILALDVAAVHLDWPKK
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaagcgatattcaagctatgcaaagatcagggatgctgcgatgcttgcgct
gtgcgttttttaggcgtaaaacatccaaacgcttacgaaaacctcaagaaacatattatt
cagtaccaggacacaaccagtgaacccaccacagcgactgacagtacaaccccagttgaa
cattcacaaacattggacactgttcaacaaccttcagaaaatggtcacagcgaagagaac
aacagtgaagatggtccgctgcggaagagacggaggactgaggcctgtgtgtgctgcctc
ggagtgctggaggaggagacgtggccggagtgtgacgagatggttaaggaagtcttggat
aagaagggctacgactgccaaacattcgcatgtgcactgtcgtcacctatctctatattg
ttgagggaaaaagttatcacgctgaagattcaagacgctatccccgactatgatcccact
gcgctgacgccgctgaaggaggcgtggaagtggctgtacgggccgcggctggcgcgcgtc
gcggggaaggcccaggactccggcgccgtgtgcccgctgctcgtcaccgtcaccatggag
taccacaacgaggcggccgagctggaactcctaaaactgatatcaccgcaactgttcgag
tcgcgaagcaggcagaagcgtcgcttcgcagtagagttcacgcggcgctcggcggagcaa
gcgctggcagcgagcgcggacgacgtcaggcgcgccgcgacgctgctgccgcccgccgcg
cgcgcgcgctgcgtcagtgtggcgtgttgcagggatcctatctacattggaggcagatac
gtgaagctgtctcgggagttgccgcagacgccgtggctggttggcggcaagcggatgatg
gagtcttcagtgcaagaggttatattcaatccgctcgccgagatattgggtatcccgcct
tcccagagcgaacaccgcctgaagctgatgtcggcgggccgcgaggacgtcgacgtccgc
tgtctgggggacgggcgacccttcgccgtagaggtggcggacccccgccacgccccgacg
ccggagcagctgcgcgcggtgtgcgccgccgtggccgccagcggggccgtgcgcgtgcgc
agcctgtgcgtggtctccaaggaggaactagcggagttgaaacagggcgaggagagcaaa
tgcaagacttacgaagctttgtgtataaagttgtcgcattccaagttcgagaccgagaaa
accccttcagaccccgtgacggtaacgccggaagacttgcagcgtatcaacacattccgc
aacacggcggagtcgcacggcgccgtggtggccgtgacccagcggacgcccatccgtgtg
ttgcaccggcggccgctgctcagtcggcagcgggaaattttgaaagttcaagctgatgcc
gtcacaggtcacccgcaactcttcacccttcacgttcaaacatcggctggtacttacgtc
aaggagtgggtccacggggagctggggcggacagcgccctctctcggcgacgctatcaaa
gctaaagtcgatattctggcattagatgtcgctgctgttcacttggactggccgaagaag
agatag
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