Amyelois transitella (navel orangeworm): 106139090
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Entry
106139090 CDS
T09957
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
atra04990
]
106139090
Domain-containing proteins not elsewhere classified [BR:
atra04990
]
Other domain-containing proteins
Patched domain-containing proteins
106139090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Lamp2_2nd
Motif
Other DBs
NCBI-GeneID:
106139090
NCBI-ProteinID:
XP_013195906
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All DBs
Position
5:complement(join(4461581..4462666,4462927..4463136,4463308..4463520,4463951..4464264,4464527..4464664,4465109..4465309,4465714..4466057,4467923..4468101,4469879..4470096,4470890..4471166))
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AA seq
1059 aa
AA seq
DB search
MGCKLTFVDDILNKSFYKLGLIVGRQPGYFIIIPVLLTLLMITGYQRVYYEMDPEYLFSP
VRGQGKLERRIVEEHFKVNYSHRFNVGRITRPGRFGRVIVVPKDNNTNMLRTEVWEELRQ
LDELVQNTTVTLPSGETFTYREECARWEGQCFVNDILNLDKIIGEVERGELNLTFPIMFN
PVTWEAHAFPVFFGGSKVVDDIIVSVPAVQLVWFVRTDTKVQQQRGAAWEDAFLDAVGVA
EDTGRFKHISVARFASRTLDHELEKNTRTVVPFFSSTFILMGIFSILTCMMGDWVRSKPW
LGLLGNISAVMATAAAFGCAIYLGISFIGINLAAPFLMIGIGIDDTFVMLAAWRRASPKL
PVPERMAAMLSEAAVSITITSVTDMLSFFIGIFSPFPSVQIFCMYSGLAVCFTFVWHLTF
FAGCVAVSGYREKQNRHTITMMKVLPESRARKEERSWLYRVFCSGGIDPADPDNPVDNKE
HCIMAFFKTTMADLLNNNAVKALVLIVFLAYLAGAGYGVTNLKEGLERRKLSKEDSYSVE
FFDREDLYYREFPYRIQVVISGQYNYSDPKVQDQVEDLTRRLENTSYISNSLYTESWLRT
FVDYVSRNNDYLNVTIENEKDFIHNLKELWLFPANPFSLDVKFNEAGDQIVASRFLIQAI
NISGTNHEKEMVKVLRDIVKESPLNVSVFHPYFVFFDQFELVKPTSIQNLCYGALMMMIT
SFIFIPNILCSLWVAFSIVSIEIGVVGYMALWDINLDSISMINLIMCIGFSVDFTAHICY
AYMSSKAKSPNDRVSECLYSLGLPIVQGSFSTILGVVALLLADSYIFSVFFKMVFMVIFF
GAMHGLFLLPVLLSLFGPGSCTKQEDIKMGKAEKFPHPYCIPHPQLVLNDQIFNGKTLNP
NGIYKIYGDDKDLGIGTSGEDTSESSSNQSQRRQLGEDETGRKKYEDGWKRSSYCQSGSQ
FQPSGELDLYGHEMDRTWQRQRYEDNRRVFDNYRKAPRSRDDDWVTTRKTSDLGPRREGT
YRVMRAHSHHNLHRPRAPRRSNSHQNLEHLDYVAEMRFP
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggttgcaaactaacattcgtcgatgacatcctgaacaaatccttctacaaactgggc
ctcatagtaggaagacagcccggctacttcatcatcataccagtgctcttaaccctgctg
atgatcaccggttatcagagggtttactatgagatggatccagagtacttgttttcacca
gtcagaggccagggcaagttggaaagaagaattgttgaagagcatttcaaagttaattat
agtcacagattcaatgttgggaggattacaaggccgggcagattcggccgcgtgatagtc
gtaccgaaagacaacaacacgaacatgctgcgaactgaggtgtgggaggaactacggcag
ttggatgagctggtgcagaacacgacggtcaccctgccttctggagagaccttcacctac
agggaggagtgcgcgaggtgggagggccagtgcttcgtcaacgatatactgaacctggac
aagattattggcgaggtggagcgtggtgaactaaacctgacgttccccatcatgttcaac
ccagtgacctgggaggcccacgccttcccagtcttcttcggggggtccaaggtcgtggat
gacatcatcgtgtccgtgccagccgtccagctcgtctggtttgtcagaaccgacaccaaa
gtgcagcaacaacgaggtgcagcgtgggaagacgccttcttggacgcagtcggagtagca
gaagatacgggtcgtttcaaacacatatcagttgcacgatttgcgtcccggactcttgat
catgagctggaaaagaacacgagaaccgtcgtgcctttcttcagctcaaccttcatatta
atgggaatattctcgatcttaacctgtatgatgggcgactgggttcgctcgaaaccctgg
ttgggtttgcttgggaacatttcggctgtgatggcaacggctgcggctttcggatgcgcc
atttatttggggatttcattcattggtatcaatttagcggcaccgtttttgatgattggt
atcggtatagacgacaccttcgtgatgctagccgcgtggaggcgggcgtcgccgaagctg
ccggtgcccgagcgcatggcggccatgttgtctgaagcagctgtctctatcaccatcact
tctgttacggacatgctgtccttcttcatcggcatcttctcgccgttcccgtctgtgcaa
atattctgcatgtattctggtttggcggtatgcttcactttcgtctggcacctgactttc
ttcgcgggctgcgtcgccgtgtcggggtatcgagagaaacaaaaccggcataccatcact
atgatgaaagttttgccagaatccagagccagaaaagaagagagatcatggctatacaga
gtgttctgtagtggtggcatagacccggctgacccagataatcccgtggacaataaagaa
cactgcattatggcgtttttcaagacaaccatggctgatttgcttaacaataacgctgtg
aaggctcttgttttaatcgtgtttttggcatacctcgcgggggcaggatacggcgtaacg
aatcttaaagaaggactggaacgaaggaaattgtctaaagaagattcatattctgtggag
ttcttcgaccgtgaagatctctattacagagaattcccttacaggattcaggttgtaatt
agcggccaatataactactcggacccaaaagtacaggaccaagtggaagatttgacacga
aggctggagaatacttcgtacatatcaaattcattgtacacagagtcctggcttcgaaca
ttcgtcgattacgtgtccagaaacaacgactatctaaatgtcacaattgaaaatgaaaag
gacttcattcataatctaaaagagttgtggctcttccctgcgaatcctttctcattagac
gtcaagtttaacgaggctggtgatcagatcgtcgcctcgaggtttttgatacaagccatc
aatatcagcggcaccaaccacgagaaggagatggtcaaagtattgagagatattgttaaa
gaatctccactgaatgtttctgtttttcatccttactttgtgttctttgatcagttcgaa
ctggtgaaaccgacttccattcagaatctatgttacggagcactcatgatgatgatcacg
tctttcatatttatccctaatattttatgttcactgtgggtggccttcagcatagtctct
attgaaatcggtgtcgttggctacatggctctctgggatattaacctcgattccatatcc
atgatcaaccttatcatgtgtattggattttccgtagattttactgctcacatttgctat
gcatatatgtcttcgaaagcaaaatctcctaacgatagagttagcgaatgtctgtactct
ttaggacttccaatagttcaaggatctttcagcactattcttggagtagtagctttactc
ctagctgacagttacatcttttccgtattcttcaaaatggttttcatggttatattcttt
ggggcaatgcatggcctcttccttttaccagtacttctgtctttatttggacctggatcg
tgcactaaacaggaagacattaaaatgggaaaagcagaaaaatttccccatccatactgt
atacctcatccacaattagttttaaatgaccaaatattcaatggcaagactttgaatcca
aatggaatttacaagatttatggagacgataaagatttaggtataggcacatctggagaa
gacacaagtgaaagtagttccaaccaatcgcagcgtagacaattgggagaagacgaaact
ggacgaaaaaaatatgaagacggctggaaaagatcaagctactgccagagcggcagccaa
ttccaaccttcaggtgaattagacctctacgggcatgagatggacagaacttggcaaaga
caacgctatgaagacaaccgtagagtgttcgacaactaccgcaaagctcccagatcgcgg
gatgacgactgggtgacgactagaaaaacaagcgacttggggcctcgacgtgaaggaact
tatagagtaatgcgggcacattcacaccacaacttgcacaggccccgcgcaccacggcga
tctaactcgcaccaaaacctagagcacttagattatgtcgcagaaatgagattcccttga
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integrated database retrieval system
