KEGG   Amyelois transitella (navel orangeworm): 106139117
Entry
106139117         CDS       T09957                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106139117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106139117
Enzymes [BR:atra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     106139117
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     106139117
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 106139117
NCBI-ProteinID: XP_013195942
LinkDB
Position
5:join(5721010..5721084,5721320..5721651,5721929..5722041,5722465..5722640,5723587..5723774,5724265..5724649,5725043..5725406,5725828..5726286,5726394..5727188,5727265..5727401,5727710..5727873,5728169..5728385)
AA seq 1134 aa
MGGLHEKARVWESNKGLREPIKTIEDKWKLVPSFLQVKGLVKQHIDSFNYFINVEIKKIV
QANEKVFCDADPLFYIKYLNAYVGTPDLEEGFNVSKPTTPHECRLRDMTYSAPITVDIEY
IRGNQRVIKNKQLIGRMPLMLRSSNCVLTNKSDFELAQLNECPHDPGGYFIIRGQEKVIL
IQEQLSRNRMIVDEFKGAIQCQVTSSTHEKKTRTNVIVKNGKYVLRHNALSDDIPIAIAF
KAMGICSDQEIMQLIGTDDNTVKKMAPCIMDCHNLKIFTPNQALAYIGSKLKVKRFQTAN
SKSRTPIDEARDLLATTILAHVTVENFNFYVKAIYLAIMVKRVIEAETNKAAIDDPDYYG
NKRLELAGSLLALMFEDLFKRFNWELKSIADKIIPKVKAAPFDVVKHMRPDLIANGLFTA
ISSGNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGM
LCPSDTPEGEACGLVKNLALMTHITTECSEEPIARLACNAGVEDVRLLGGEEINHPAVYM
VFLNGNILGVTRQYKRLIRVFRMFRRRGLISAFVSIYPNHNQRTVYICSDGGRLCRPYII
VENGYPLVQQGHIKELNRGIRKFQDFLSDGLIEYLDVNEENDSHIATVEAEIDPYVTTHL
EIEPFTILGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGTIGYNQKNRIDTLMYNLVYPQC
PMVKTRTIELTNFDKLPAGQNATVAVMSYSGYDIEDALILNRASIDRGYGRCLVYKSAKT
TMKRYSNQTSDRILGPSRDANTGKIIRAHEILDTDGIAAPGEMVENRQVLINKQMPPATI
NPVPQGQPQQVEYKDVPVTYKGPVESYIEKVMVSSNSEDAFLIKILLRQTRVPEIGDKFS
SRHGQKGVTGLIVQQEDMPFNDRGICPDMIMNPHGFPSRMTVGKTIELLAGKAGLMEGKF
HYGTAFGGSKVQDVCNELEKHGYNYQGKDIFYSGLTGEPLEAYIYSGPVYYQKLKHMVQD
KMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLASDAFSAD
ICGACGRLAARAWCHACRSSAAVSTVDMPYACKLLFQELASMNIVPKLTLKKYS
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgggtggactacatgaaaaagcgcgtgtctgggaatcaaacaaaggtctacgagaacct
ataaaaactatagaggacaaatggaagttggtgccatcgtttctgcaagtcaaaggtctt
gttaaacaacatatagactcatttaactattttataaatgtggaaatcaagaaaattgtt
caagctaatgagaaagtattttgtgatgctgatccacttttttatatcaaatatttgaat
gcatatgttggcacccctgatctagaggagggatttaatgtctcaaaaccaactacccca
catgaatgtcgtttaagggacatgacttattctgctcctatcacagttgatattgagtac
atcagaggcaaccagcgagtcatcaaaaacaagcagttgattggcagaatgcctttgatg
ctgaggtcttcaaattgcgttctcacaaataagtcagattttgaattggcccagctgaat
gaatgtccacatgaccctggcggttatttcatcattcgaggacaagaaaaagtgatcctg
atccaagagcaattgtctaggaacagaatgatagttgatgagttcaaaggagctatccag
tgtcaagttacaagttctacacacgaaaagaaaacgaggacaaatgttattgtgaagaat
ggaaaatatgtgctaagacacaatgcattatctgatgacattccaatagctatagccttt
aaagctatgggaatctgcagtgaccaggagataatgcagttgattggcactgatgataac
actgtgaagaaaatggctccttgtattatggattgtcacaatttgaaaatctttacacca
aatcaagcattagcatacatcggtagcaagctgaaagtgaaaagatttcaaacggcaaat
tctaagtctcgtactcctattgatgaagctcgagatcttttagccacaactatattagct
catgttacagtagaaaactttaacttctatgtcaaagccatttatttggccatcatggta
aagagagtgatagaagcggaaacaaataaggcagctattgacgaccccgattattatgga
aataaacgattggaactggcggggtccttattggctttgatgtttgaagatttattcaaa
agattcaattgggaattgaagtccatagcagataaaataataccgaaggtgaaagctgca
cccttcgatgtagtgaagcatatgcggcccgatttaatcgctaatgggttattcacggct
atatcttctggaaattggaccatcaaaaggtttaaaatggaaaggcatggggtaactcaa
gtactcagccgacttagttacatatcagcattgggtatgatgaccagagttaattctcaa
tttgagaaaactagaaaggtttcagggcctcggtctcttcagccttcacagtggggtatg
ctttgcccttccgacacacctgaaggagaggcttgcggtcttgtcaagaacttggcgtta
atgacgcacatcactactgaatgttcggaggaaccgatagcgagattagcttgtaatgcc
ggcgtcgaggacgtgagattactaggaggagaagaaataaatcatcccgccgtttacatg
gtattcctaaatggtaacattctaggtgttacgaggcagtacaaacgtcttatccgggta
ttcagaatgttcagaaggcgcggtctaatctcggcatttgtttctatttatccaaaccac
aatcagagaactgtgtatatttgcagcgatggcggtagactatgtcggccatatattatt
gtcgagaatggttatcctttagtacagcaaggccatataaaagaacttaatagaggcata
agaaaatttcaggatttcctttcagatggacttatcgagtatttagatgtcaatgaagag
aatgatagtcatattgcaactgttgaagctgaaattgacccatatgtgactacacatctt
gagattgaacctttcactattttgggcgtgtgtgctggtcttgtaccatatcctcatcat
aatcaaagtcctaggaatacttatcaatgcgctatgggtaaacaagcaatgggaacaata
ggttataatcaaaagaatagaattgatacacttatgtataatttagtgtatccgcaatgc
cctatggtaaaaactcggacaatagaactgacaaacttcgacaagctgcctgctggacaa
aatgccacagttgctgtgatgagttacagtggatacgacattgaagacgcgttgattctc
aatagagcttcaatcgacagagggtacggtcgttgcctagtttataaaagtgcaaaaaca
accatgaagaggtacagcaatcagacttcagacagaattttaggcccatctagagatgca
aatacaggaaaaattattagagcgcatgaaatattagatactgatggcattgccgcgcct
ggggaaatggtagagaacaggcaagttctgatcaacaaacaaatgccgccggccacaatc
aatcccgtgccccaaggtcaaccgcagcaagtggaatacaaagatgtaccagtcacatat
aaaggacctgtcgagtcttacattgaaaaagtcatggtgtcgtcaaattcagaagatgct
tttcttataaaaatactgcttaggcaaacaagagttccggagatcggtgataagttcagt
tctcggcacggacagaagggagtgacggggcttatagtgcagcaggaagacatgccattc
aacgacagaggcatctgtcccgacatgatcatgaacccgcacggtttcccctcgagaatg
acagttgggaaaaccatagagttgcttgctgggaaagctggccttatggaagggaaattt
cattatggtactgcatttggtggctcgaaggttcaagacgtatgcaatgaattggaaaaa
catggttataattatcaaggcaaagatattttctattctggtttgactggagaacccttg
gaagcgtatatttactcaggcccagtgtattaccagaagctgaagcacatggtgcaggac
aagatgcacgctcgagcgcgcggcccgcgcgccgtgctcacgcggcagcccacggagggg
cgctcgcgcgacggcggcctgcgcctgggggagatggaacgagactgcctaatcggatat
ggcgccagcatgttgctgatggagcgcctgatgctggcatcggacgcgttcagcgcggac
atctgcggcgcgtgcgggcggctggcggcgcgcgcctggtgccacgcgtgccgctcgtcc
gccgccgtctccaccgtcgacatgccctacgcatgcaagctgctgttccaggaactggcc
tctatgaatatagtgcctaagcttactcttaagaaatattcgtga

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